RPSBLAST alignment for GI: 254780382 and conserved domain: KOG0343

>gnl|CDD|35564 KOG0343, KOG0343, KOG0343, RNA Helicase [RNA processing and modification]. Length = 758
 Score =  241 bits (615), Expect = 4e-64
 Identities = 134/394 (34%), Positives = 215/394 (54%), Gaps = 13/394 (3%)

Query: 1   MDFADLGLSPKVVCAVLDAGYVKPTPIQIKTIPLVLQRHDVCGIAQTGTGKTASFVLPML 60
             FADL LS K +  + +A +VK T IQ  TIP+ LQ HDV G A+TG+GKT +F++P+L
Sbjct: 69  KKFADLPLSQKTLKGLKEAKFVKMTEIQRDTIPMALQGHDVLGAAKTGSGKTLAFLVPVL 128

Query: 61  TIL-EKGRARVRMPRTLILEPTRELAAQVADNFEKYGKNYNLTVALLIGGIPFEAQNKKL 119
             L     +       LI+ PTRELA Q  +   K GK+++ +  L+IGG   + + +++
Sbjct: 129 EALYRLKWSPTDGLGALIISPTRELALQTFEVLNKVGKHHDFSAGLIIGGKDVKFELERI 188

Query: 120 ERGADVLICTPGRILDHFNRGKLL-MNNIEILVIDEADRMLDMGFIPYIQNITSLVPFTR 178
            +  ++L+CTPGR+L H +       +N+++LV+DEADRMLDMGF   +  I   +P  R
Sbjct: 189 SQ-MNILVCTPGRLLQHMDENPNFSTSNLQMLVLDEADRMLDMGFKKTLNAIIENLPKKR 247

Query: 179 QTLLFSATMTDELQKVSENFLQNPKRIEV--NTPSSTAETIEHCFVATYAQYSKKCALLQ 236
           QTLLFSAT T  ++ ++   L++P  + V  N  ++T   ++  +V    +   K  +L 
Sbjct: 248 QTLLFSATQTKSVKDLARLSLKDPVYVSVHENAVAATPSNLQQSYVIVPLE--DKIDMLW 305

Query: 237 QLLQSQDTMKNGIIFCNQKKNVVNLCHSLEK--QGFSVCAIHGNIDQRSRMKILSNFKEG 294
             ++S    K  I+F +  K V  L  +  +   G  + A+HG + Q+ R+++   F   
Sbjct: 306 SFIKSHLKKK-SIVFLSSCKQVKFLYEAFCRLRPGIPLLALHGTMSQKKRIEVYKKFVRK 364

Query: 295 TIQLMVASDLAARGLDIPDVGHVFNFDVPNRAENYIHRIGRTGRAGRHGKAFT-LVAKED 353
              ++  +D+AARGLD P V  V   D P   + YIHR+GRT R    G++   L   E+
Sbjct: 365 RAVVLFCTDVAARGLDFPAVDWVIQVDCPEDVDTYIHRVGRTARYKERGESLLMLTPSEE 424

Query: 354 IKHIDAIEK-LIE-KKVDWLNGDLSSLNPPLEKI 385
              +  ++K  I  K++      L+S+   LE +
Sbjct: 425 EAMLKKLQKKKIPIKEIKIDPEKLTSIRNKLEAL 458