RPSBLAST alignment for GI: 254780382 and conserved domain: KOG0343
>gnl|CDD|35564 KOG0343, KOG0343, KOG0343, RNA Helicase [RNA processing and modification]. Length = 758
Score = 241 bits (615), Expect = 4e-64
Identities = 134/394 (34%), Positives = 215/394 (54%), Gaps = 13/394 (3%)
Query: 1 MDFADLGLSPKVVCAVLDAGYVKPTPIQIKTIPLVLQRHDVCGIAQTGTGKTASFVLPML 60
FADL LS K + + +A +VK T IQ TIP+ LQ HDV G A+TG+GKT +F++P+L
Sbjct: 69 KKFADLPLSQKTLKGLKEAKFVKMTEIQRDTIPMALQGHDVLGAAKTGSGKTLAFLVPVL 128
Query: 61 TIL-EKGRARVRMPRTLILEPTRELAAQVADNFEKYGKNYNLTVALLIGGIPFEAQNKKL 119
L + LI+ PTRELA Q + K GK+++ + L+IGG + + +++
Sbjct: 129 EALYRLKWSPTDGLGALIISPTRELALQTFEVLNKVGKHHDFSAGLIIGGKDVKFELERI 188
Query: 120 ERGADVLICTPGRILDHFNRGKLL-MNNIEILVIDEADRMLDMGFIPYIQNITSLVPFTR 178
+ ++L+CTPGR+L H + +N+++LV+DEADRMLDMGF + I +P R
Sbjct: 189 SQ-MNILVCTPGRLLQHMDENPNFSTSNLQMLVLDEADRMLDMGFKKTLNAIIENLPKKR 247
Query: 179 QTLLFSATMTDELQKVSENFLQNPKRIEV--NTPSSTAETIEHCFVATYAQYSKKCALLQ 236
QTLLFSAT T ++ ++ L++P + V N ++T ++ +V + K +L
Sbjct: 248 QTLLFSATQTKSVKDLARLSLKDPVYVSVHENAVAATPSNLQQSYVIVPLE--DKIDMLW 305
Query: 237 QLLQSQDTMKNGIIFCNQKKNVVNLCHSLEK--QGFSVCAIHGNIDQRSRMKILSNFKEG 294
++S K I+F + K V L + + G + A+HG + Q+ R+++ F
Sbjct: 306 SFIKSHLKKK-SIVFLSSCKQVKFLYEAFCRLRPGIPLLALHGTMSQKKRIEVYKKFVRK 364
Query: 295 TIQLMVASDLAARGLDIPDVGHVFNFDVPNRAENYIHRIGRTGRAGRHGKAFT-LVAKED 353
++ +D+AARGLD P V V D P + YIHR+GRT R G++ L E+
Sbjct: 365 RAVVLFCTDVAARGLDFPAVDWVIQVDCPEDVDTYIHRVGRTARYKERGESLLMLTPSEE 424
Query: 354 IKHIDAIEK-LIE-KKVDWLNGDLSSLNPPLEKI 385
+ ++K I K++ L+S+ LE +
Sbjct: 425 EAMLKKLQKKKIPIKEIKIDPEKLTSIRNKLEAL 458