RPSBLAST alignment for GI: 254780382 and conserved domain: KOG0346
>gnl|CDD|35567 KOG0346, KOG0346, KOG0346, RNA helicase [RNA processing and modification]. Length = 569
Score = 204 bits (521), Expect = 3e-53
Identities = 112/405 (27%), Positives = 191/405 (47%), Gaps = 44/405 (10%)
Query: 3 FADLGLSPKVVCAVLDAGYVKPTPIQIKTIPLVLQRHDVCGIAQTGTGKTASFVLPMLTI 62
F + GL +++ A+ G+ KPT IQ IPL L+ DV A+TG+GKTA++++P+L
Sbjct: 21 FEEFGLDSRLLKAITKLGWEKPTLIQSSAIPLALEGKDVVARARTGSGKTAAYLIPLLQK 80
Query: 63 L---EKGRARVRMPRTLILEPTRELAAQVADNFEKYGK--NYNLTVALLIGGIPFEAQNK 117
L +K + P +IL PT+ELA QV EK + + +L L + +
Sbjct: 81 LLAEKKTNDGEQGPSAVILVPTKELAQQVYKVIEKLVEYCSKDLRAINLASSMSDSVNSV 140
Query: 118 KLERGADVLICTPGRILDHFNRGKLL-MNNIEILVIDEADRMLDMGFIPYIQNITSLVPF 176
L D+++ TP ++L H G L ++++ LV+DEAD +L G+ ++ + S +P
Sbjct: 141 ALMDLPDIVVATPAKLLRHLAAGVLEYLDSLSFLVVDEADLLLSFGYEEDLKKLRSHLPR 200
Query: 177 TRQTLLFSATMTDELQKVSENFLQNPKRIEVNTPS-STAETIEHCFVATYAQYSKKCALL 235
Q L SAT++D++Q + + FL NP +++ + + V + K LL
Sbjct: 201 IYQCFLMSATLSDDVQALKKLFLHNPVILKLTEGELPNPDQLTQYQVKCSEE--DKFLLL 258
Query: 236 QQLLQSQDTMKNGIIFCNQKKNVVNLCHSLEKQGFSVCAIHGNIDQRSRMKILSNFKEGT 295
LL+ + +IF N L LE+ G C ++ + SR I+ F +G
Sbjct: 259 YALLKLRLIRGKSLIFVNTIDRCYRLKLFLEQFGIKSCILNSELPANSRCHIIEQFNKGL 318
Query: 296 IQLMVASDL-----------------------------------AARGLDIPDVGHVFNF 320
+++A+D +RG+D V +V NF
Sbjct: 319 YDIVIATDDSADGDKLEEEVKGKSDEKNPKNDKKSKKKLDKESGVSRGIDFHHVSNVLNF 378
Query: 321 DVPNRAENYIHRIGRTGRAGRHGKAFTLVAKEDIKHIDAIEKLIE 365
D P +YIHR+GRT R G A + V+ ++ +++E +++
Sbjct: 379 DFPETVTSYIHRVGRTARGNNKGTALSFVSPKEEFGKESLESILK 423