RPSBLAST alignment for GI: 254780382 and conserved domain: KOG0350
>gnl|CDD|35571 KOG0350, KOG0350, KOG0350, DEAD-box ATP-dependent RNA helicase [RNA processing and modification]. Length = 620
Score = 194 bits (495), Expect = 3e-50
Identities = 118/403 (29%), Positives = 184/403 (45%), Gaps = 65/403 (16%)
Query: 26 PIQIKTIPLVLQRH---------DVCGIAQTGTGKTASFVLPMLTILEKGRARVRMPRTL 76
P+Q +P +L+ D+C A TG+GKT ++V+P++ +L V+ R +
Sbjct: 162 PVQYAVLPSLLEEIRSPPPSRPRDICVNAPTGSGKTLAYVIPIVQLL--SSRPVKRLRAV 219
Query: 77 ILEPTRELAAQVADNFEKYGKNYNLTVALLIGGIPFEAQNKKL-----ERGADVLICTPG 131
++ PTRELA QV D F++ L V L G E + ++L E D+L+ TPG
Sbjct: 220 VIVPTRELALQVYDTFKRLNSGTGLAVCSLSGQNSLEDEARQLASDPPECRIDILVATPG 279
Query: 132 RILDHFNRGK-LLMNNIEILVIDEADRMLDMGF-----------------------IPYI 167
R++DH N K + ++ LVIDEADR+LD F I
Sbjct: 280 RLVDHLNNTKSFDLKHLRFLVIDEADRLLDQSFQEWLDTVMSLCKTMKRVACLDNIIRQR 339
Query: 168 QNITSLV-----------PFTRQTLLFSATMTDELQKVSENFLQNPKRIEVNTPS----S 212
Q V L+FSAT++ + K+ + L P+ V+ P S
Sbjct: 340 QAPQPTVLSELLTKLGKLYPPLWKLVFSATLSQDPSKLKDLTLHIPRLFHVSKPLIGRYS 399
Query: 213 TAETIEHCFVATYAQYSKKCALLQQLLQSQDTMKNGIIFCNQKKNVVNLCH----SLEKQ 268
++ H V T ++ K + L+ S + + F N + L H
Sbjct: 400 LPSSLSHRLVVTEPKF--KPLAVYALITSNK-LNRTLCFVNSVSSANRLAHVLKVEFCSD 456
Query: 269 GFSVCAIHGNIDQRSRMKILSNFKEGTIQLMVASDLAARGLDIPDVGHVFNFDVPNRAEN 328
F V G ++ + R K+L F +G I +++ SD ARG+D+ DV +V N+D P +
Sbjct: 457 NFKVSEFTGQLNGKRRYKMLEKFAKGDINVLICSDALARGIDVNDVDNVINYDPPASDKT 516
Query: 329 YIHRIGRTGRAGRHGKAFTLVAKEDIKHIDAIEKLIEKKVDWL 371
Y+HR GRT RAG+ G A TL+ K + + KL++K W
Sbjct: 517 YVHRAGRTARAGQDGYAITLLDKHEKRL---FSKLLKKTNLWD 556