HHsearch alignment for GI: 254780383 and conserved domain: COG0122

Probab=99.67  E-value=4.3e-15  Score=122.33  Aligned_cols=127  Identities=26%  Similarity=0.334  Sum_probs=103.1

Q ss_pred             CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHC----------CCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             8689999999996333203567998998731----------762000101268999999997300379999997523554
Q gi|254780383|r   46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEI----------ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHIL  115 (227)
Q Consensus        46 ~~p~~~LVa~iLs~qT~d~~v~~~~~~L~~~----------ypt~e~l~~a~~~el~~~ir~~G~~~~KAk~I~~~a~~i  115 (227)
T Consensus       103 ~d~fe~lv~aI~~QqvS~~~A~~i~~rl~~~~g~~~~~~~~fptpe~l~~~~~~~l~----~~g~s~~Ka~yi~~~A~~~  178 (285)
T COG0122         103 PDPFEALVRAILSQQVSVAAAAKIWARLVSLYGNALEIYHSFPTPEQLAAADEEALR----RCGLSGRKAEYIISLARAA  178 (285)
T ss_pred             CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCHHHHH----HHCCCHHHHHHHHHHHHHH
T ss_conf             678999999999765059999999999999818766656679899999847999998----8378577899999999999


Q ss_pred             HHHH-C-CC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH-CCCHHHHHHHHHHHHCCCCHHH
Q ss_conf             4420-0-10-----00014567776432358888999987542-1000-1210467877656540788899
Q gi|254780383|r  116 INEF-D-NK-----IPQTLEGLTRLPGIGRKGANVILSMAFGI-PTIG-VDTHIFRISNRIGLAPGKTPNK  177 (227)
Q Consensus       116 ~~~~-~-g~-----vP~~~~~L~~LpGVG~ktA~~il~~~~~~-p~~~-VDthv~Rv~~Rlgl~~~~~~~~  177 (227)
T Consensus       179 ~~g~~~~~~l~~~~~e~a~e~L~~i~GIG~WTAe~~llf~lgr~dvfP~~D~~lr~~~~~~~-~~~~~~~~  248 (285)
T COG0122         179 AEGELDLSELKPLSDEEAIEELTALKGIGPWTAEMFLLFGLGRPDVFPADDLGLRRAIKKLY-RLPTRPTE  248 (285)
T ss_pred             HCCCCCHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH-CCCCCCHH
T ss_conf             85996567662588999999987378867999999999816889867715599999999972-57878508