HHsearch alignment for GI: 254780383 and conserved domain: COG1194
>COG1194 MutY A/G-specific DNA glycosylase [DNA replication, recombination, and repair].
Probab=100.00 E-value=1.1e-44 Score=321.51 Aligned_cols=204 Identities=19% Similarity=0.342 Sum_probs=179.8
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCC---CHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHH
Q ss_conf 999999999999767999877778---68999999999633320356799899873176200010126899999999730
Q gi|254780383|r 23 KELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIG 99 (227)
Q Consensus 23 ~~~~~I~~~L~~~yp~~~~~l~~~---~p~~~LVa~iLs~qT~d~~v~~~~~~L~~~ypt~e~l~~a~~~el~~~ir~~G 99 (227)
T Consensus 6 ~~~~~~~~~ll~Wy~~~~R~LPWR~~~~PY~VwvSEiMLQQT~v~~Vi~yy~~fl~rfPti~~LA~A~~~evl~~W~gLG 85 (342)
T COG1194 6 GDIEKFQEALLDWYDKNGRDLPWRETKDPYRVWVSEIMLQQTQVATVIPYYERFLERFPTIKALAAAPEDEVLKAWEGLG 85 (342)
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHCC
T ss_conf 24578888999999974874887789986220268887600607455456999998689989986688889999987167
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH-HHHCCC----C
Q ss_conf 03799999975235544420010000145677764323588889999875421000121046787765-654078----8
Q gi|254780383|r 100 IYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRI-GLAPGK----T 174 (227)
Q Consensus 100 ~~~~KAk~I~~~a~~i~~~~~g~vP~~~~~L~~LpGVG~ktA~~il~~~~~~p~~~VDthv~Rv~~Rl-gl~~~~----~ 174 (227)
T Consensus 86 Yy-sRArnL~~~A~~v~~~~~G~~P~~~~~l~~LpGiG~yTa~Ail~~a~~~~~~~lDgNV~RVl~R~f~i~~~~~~~~~ 164 (342)
T COG1194 86 YY-SRARNLHKAAQEVVERHGGEFPDDEEELAALPGVGPYTAGAILSFAFNQPEPVLDGNVKRVLSRLFAISGDIGKPKT 164 (342)
T ss_pred HH-HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEECCHHEEEHHHHCCCCCCCCCCH
T ss_conf 37-89999999999999981997999999998678973889999999871898753305422112665314365565410
Q ss_pred HHHHHHHHHHCC-CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCHHHCC
Q ss_conf 899999996218-84226789999999966516489989472840331768519
Q gi|254780383|r 175 PNKVEQSLLRII-PPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227 (227)
Q Consensus 175 ~~~~~~~l~~~~-p~~~~~~~~~~li~~G~~iC~~~~P~C~~C~l~~~C~~~k~ 227 (227)
T Consensus 165 ~~~~~~~~~~ll~p~~~~~~fnqammdlGA~ICt~~~P~C~~CPl~~~c~a~~~ 218 (342)
T COG1194 165 KKELWELAEQLLTPDRRPGDFNQAMMDLGATICTAKKPKCSLCPLRDNCAAYRN 218 (342)
T ss_pred HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHC
T ss_conf 589999999744898876799999998636761589998773946688999981