HHsearch alignment for GI: 254780383 and conserved domain: COG2231
>COG2231 Uncharacterized protein related to Endonuclease III [DNA replication, recombination, and repair].
Probab=100.00 E-value=4.3e-38 Score=277.23 Aligned_cols=207 Identities=25% Similarity=0.384 Sum_probs=186.9
Q ss_pred CCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC-CCCHHHCCCCHHHHHHHHHH
Q ss_conf 39989999999999997679998777786899999999963332035679989987317-62000101268999999997
Q gi|254780383|r 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA-DTPQKMLAIGEKKLQNYIRT 97 (227)
Q Consensus 19 ~~~~~~~~~I~~~L~~~yp~~~~~l~~~~p~~~LVa~iLs~qT~d~~v~~~~~~L~~~y-pt~e~l~~a~~~el~~~ir~ 97 (227)
T Consensus 2 ~~~~~~~~~iy~~L~~~yg-~q~WWp~~~~~EiiigAILtQNT~WknvekAlenLk~~~~~~l~~I~~~~~~~L~elIrp 80 (215)
T COG2231 2 MLNMENITKIYKELLRLYG-DQGWWPADNKDEIIIGAILTQNTSWKNVEKALENLKNEGILNLKKILKLDEEELAELIRP 80 (215)
T ss_pred CCCHHHHHHHHHHHHHHCC-CCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHC
T ss_conf 6514889999999999758-866788987206899889852452999999999998815679999845899999998704
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCC---CCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC
Q ss_conf 300379999997523554442001---0000-145677764323588889999875421000121046787765654078
Q gi|254780383|r 98 IGIYRKKSENIISLSHILINEFDN---KIPQ-TLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK 173 (227)
Q Consensus 98 ~G~~~~KAk~I~~~a~~i~~~~~g---~vP~-~~~~L~~LpGVG~ktA~~il~~~~~~p~~~VDthv~Rv~~Rlgl~~~~ 173 (227)
T Consensus 81 sGFYnqKa~rLk~l~k~l~~~~~~~~~~~~~~~R~~LL~iKGIG~ETaDsILlYa~~rp~FVvD~YtrR~l~rlg~i~~k 160 (215)
T COG2231 81 SGFYNQKAKRLKALSKNLAKFFINLESFKSEVLREELLSIKGIGKETADSILLYALDRPVFVVDKYTRRLLSRLGGIEEK 160 (215)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCC
T ss_conf 24089999999999999999864231115188999987268866223999999980486446329999999994551025
Q ss_pred CHHHHHHHHHHCCCHH--HHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCHHHCC
Q ss_conf 8899999996218842--26789999999966516489989472840331768519
Q gi|254780383|r 174 TPNKVEQSLLRIIPPK--HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227 (227)
Q Consensus 174 ~~~~~~~~l~~~~p~~--~~~~~~~~li~~G~~iC~~~~P~C~~C~l~~~C~~~k~ 227 (227)
T Consensus 161 ~ydeik~~fe~~l~~~~~lyqe~HAlIv~~~K~f~~k-~~~~~~cpL~~~~~~~~~ 215 (215)
T COG2231 161 KYDEIKELFEENLPENLRLYQEFHALIVEHAKHFCKK-KPLCEKCPLKEKCKKYRR 215 (215)
T ss_pred CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCC-CCCCCCCHHHHHHHHCCC
T ss_conf 4999999998535067999999999999999998158-867787658998752269