HHsearch alignment for GI: 254780383 and conserved domain: PRK10880

Probab=100.00  E-value=0  Score=352.51  Aligned_cols=201  Identities=18%  Similarity=0.271  Sum_probs=179.8

Q ss_pred             HHHHHHHHHHCCC-CCCCCCC---CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHH
Q ss_conf             9999999997679-9987777---86899999999963332035679989987317620001012689999999973003
Q gi|254780383|r   26 EEIFYLFSLKWPS-PKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIY  101 (227)
Q Consensus        26 ~~I~~~L~~~yp~-~~~~l~~---~~p~~~LVa~iLs~qT~d~~v~~~~~~L~~~ypt~e~l~~a~~~el~~~ir~~G~~  101 (227)
T Consensus         4 ~~f~~~ll~Wy~~~~r~~lPWr~~~~PY~vwvSEiMLQQTqv~tV~~yy~rf~~~fP~~~~LA~A~~~~vl~~W~GLGYY   83 (350)
T PRK10880          4 SQFSAQVLDWYDKYGRKTLPWQIDKTPYKVWLSEVMLQQTQVATVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLGYY   83 (350)
T ss_pred             HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHCCCH
T ss_conf             99999999999873998899899998226999999983487789999999999988399999779999999986406938


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH-HHHCCCCHHHHHH
Q ss_conf             799999975235544420010000145677764323588889999875421000121046787765-6540788899999
Q gi|254780383|r  102 RKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRI-GLAPGKTPNKVEQ  180 (227)
Q Consensus       102 ~~KAk~I~~~a~~i~~~~~g~vP~~~~~L~~LpGVG~ktA~~il~~~~~~p~~~VDthv~Rv~~Rl-gl~~~~~~~~~~~  180 (227)
T Consensus        84 -~RArnLh~aA~~i~~~~~G~~P~~~~~L~~LPGIG~yTA~AI~siaf~~~~~ivDgNV~RVlsR~~~i~~~~~~~~~~~  162 (350)
T PRK10880         84 -ARARNLHKAAQQVATLHGGKFPETFEEVAALPGVGRSTAGAILSLSLGKHFPILDGNVKRVLARCYAVSGWPGKKEVEN  162 (350)
T ss_pred             -HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHH
T ss_conf             -9999999999999997589898259998626688727999999997699535766440328888750336887559999


Q ss_pred             H----HHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCHHHCC
Q ss_conf             9----9621884226789999999966516489989472840331768519
Q gi|254780383|r  181 S----LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ  227 (227)
Q Consensus       181 ~----l~~~~p~~~~~~~~~~li~~G~~iC~~~~P~C~~C~l~~~C~~~k~  227 (227)
T Consensus       163 ~l~~~a~~~~p~~~~~~~nQAlMDLGA~vCtp~~P~C~~CPl~~~C~A~~~  213 (350)
T PRK10880        163 KLWSLSEQVTPAVGVERFNQAMMDLGAMVCTRSKPKCELCPLQNGCIAAAN  213 (350)
T ss_pred             HHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHC
T ss_conf             999999973884327799999999734102799998788988220646427