HHsearch alignment of GI: 254780383 and MMDB domain: 1mpg_A_105-231
>1mpg_A (A:105-231) ALKA, 3-methyladenine DNA glycosylase II; DNA repair, base excision, methylation, hydrolase; 1.80A {Escherichia coli}
Probab=99.84 E-value=2.2e-21 Score=164.27 Aligned_cols=111 Identities=18% Similarity=0.214 Sum_probs=98.7
Q ss_pred CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHCCC---------CHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 777786899999999963332035679989987317620001012---------68999999997300379999997523
Q gi|254780383|r 42 ELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI---------GEKKLQNYIRTIGIYRKKSENIISLS 112 (227)
Q Consensus 42 ~l~~~~p~~~LVa~iLs~qT~d~~v~~~~~~L~~~ypt~e~l~~a---------~~~el~~~ir~~G~~~~KAk~I~~~a 112 (227)
++...|||+.||++||+|||+++++.+++.+|+++|++++..... ..+.+++.++++||+++||++|+++|
T Consensus 3 ~~~~~~pfe~lv~~Il~Qq~~~~~a~~~~~~l~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~ka~~i~~~a 82 (127)
T 1mpg_A 3 LPGCVDAFEQGVRAILGQLVSVAMAAKLTARVAQLYGERLDDFPEYICFPTPQRLAAADPQALKALGMPLKRAEALIHLA 82 (127)
T ss_dssp CCCCSCHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHCCBCSSCTTCBCCCCHHHHHTCCHHHHHHTTSCHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCHHHHHHCCCCHHHHHHHHHHH
T ss_conf 89989989999999996723299999999999998588767687656799899997699999975288665899999999
Q ss_pred HHHHH-----HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 55444-----20010000145677764323588889999875421
Q gi|254780383|r 113 HILIN-----EFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIP 152 (227)
Q Consensus 113 ~~i~~-----~~~g~vP~~~~~L~~LpGVG~ktA~~il~~~~~~p 152 (227)
+.+.+ .+++.+|..+++|++|||||+|||++||+|+||+.
T Consensus 83 ~~~~~~~l~~~~~~~~~~~~~~L~~lpGIG~~tA~~vll~~~gr~ 127 (127)
T 1mpg_A 83 NAALEGTLPMTIPGDVEQAMKTLQTFPGIGRWTANYFALRGWQAK 127 (127)
T ss_dssp HHHHHTCSCSSCCSCHHHHHHHHTTSTTCCHHHHHHHHHHHSCCS
T ss_pred HHHHCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCC
T ss_conf 999829942134467899999998658978999999999857998