HHsearch results for GI: 254780383 and protein with PDBid: 1ixr_A

>1ixr_A Holliday junction DNA helicase RUVA; heterooligomeric complex, octameric RUVA, AAA-ATPase domain, complex with nucleotide, hydrolase; HET: ANP; 3.30A {Thermus thermophilus} SCOP: a.60.2.1 b.40.4.2
Probab=91.76  E-value=0.18  Score=29.19  Aligned_cols=72  Identities=18%  Similarity=0.134  Sum_probs=45.6

Q ss_pred             CCCCHHHCCCCHHHHHHHHHHH-HHHHHHHHHHHHHH--HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             7620001012689999999973-00379999997523--554442001000014567776432358888999987542
Q gi|254780383|r   77 ADTPQKMLAIGEKKLQNYIRTI-GIYRKKSENIISLS--HILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGI  151 (227)
Q Consensus        77 ypt~e~l~~a~~~el~~~ir~~-G~~~~KAk~I~~~a--~~i~~~~~g~vP~~~~~L~~LpGVG~ktA~~il~~~~~~  151 (227)
                      .++...+.+..+.++-+.+-.+ |.-...|-.|....  ..+..   -..-.|.+.|.++||||+|||.-|+...-++
T Consensus        56 ~~~LyGF~~~~Er~lF~~Li~V~GIGpK~Al~ILs~~~~~~l~~---aI~~~D~~~L~~vpGIGkKtAerIilELk~K  130 (191)
T 1ixr_A           56 GLSLYGFPDEENLALFELLLSVSGVGPKVALALLSALPPRLLAR---ALLEGDARLLTSASGVGRRLAERIALELKGK  130 (191)
T ss_dssp             CCCEEEESSHHHHHHHHHHHSSSCCCHHHHHHHHHHSCHHHHHH---HHHTTCHHHHTTSTTCCHHHHHHHHHHHTTT
T ss_pred             CCEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHH---HHHCCCHHHHHCCCCCCHHHHHHHHHHHHHH
T ss_conf             86677118289999999985768837788988872599999999---9983999995018884688999999999864