HHsearch results for GI: 254780383 and protein with PDBid: 1kea_A

>1kea_A Possible G-T mismatches repair enzyme; DNA repair, DNA glycosylase, DNA mismatch, methylation, base twisting, hydrolase; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.96.1.2
Probab=100.00  E-value=0  Score=414.37  Aligned_cols=207  Identities=19%  Similarity=0.406  Sum_probs=192.2

Q ss_pred             CHHHHHHHHHHHHHHCCCCCCCCCC---CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHH
Q ss_conf             9899999999999976799987777---8689999999996333203567998998731762000101268999999997
Q gi|254780383|r   21 TPKELEEIFYLFSLKWPSPKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRT   97 (227)
Q Consensus        21 ~~~~~~~I~~~L~~~yp~~~~~l~~---~~p~~~LVa~iLs~qT~d~~v~~~~~~L~~~ypt~e~l~~a~~~el~~~ir~   97 (227)
                      +.++.+.+...|.+||+..+.+|+|   +|||++||++||||||+|++|++++++|+++||||++|+++++++|+++|++
T Consensus         5 ~~~~~~~~~~~ll~wy~~~~r~lpWr~~~dp~~vlv~~iLsqqT~~~~v~~~~~~l~~~~pt~~~la~a~~~el~~~i~~   84 (221)
T 1kea_A            5 TNKKRKVFVSTILTFWNTDRRDFPWRHTRDPYVILITEILLRRTTAGHVKKIYDKFFVKYKCFEDILKTPKSEIAKDIKE   84 (221)
T ss_dssp             HHHHHHHHHHHHHHHHHHSCCCCGGGGCCCHHHHHHHHHHTTTSCHHHHHHHHHHHHHHCCSHHHHHHSCHHHHHHHTGG
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHH
T ss_conf             07789999999999999669999999899879999999998219599999999999997889999982999999999998


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC----
Q ss_conf             3003799999975235544420010000145677764323588889999875421000121046787765654078----
Q gi|254780383|r   98 IGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK----  173 (227)
Q Consensus        98 ~G~~~~KAk~I~~~a~~i~~~~~g~vP~~~~~L~~LpGVG~ktA~~il~~~~~~p~~~VDthv~Rv~~Rlgl~~~~----  173 (227)
                      +|||++||++|++++++|.++|||.+|.++++|++|||||+|||++||+|+||+|+|+||+||+||++|+|+...+    
T Consensus        85 ~G~~~~KA~~l~~~a~~i~~~~~g~vp~~~~eL~~LPGVG~ktA~~vl~~a~~~~~~~VD~~v~Rv~~R~~~~~~~~~~~  164 (221)
T 1kea_A           85 IGLSNQRAEQLKELARVVINDYGGRVPRNRKAILDLPGVGKYTCAAVMCLAFGKKAAMVDANFVRVINRYFGGSYENLNY  164 (221)
T ss_dssp             GSCHHHHHHHHHHHHHHHHHHHTTSCCSCHHHHHTSTTCCHHHHHHHHHHTTCCCCCCCCHHHHHHHHHHHCGGGTTCCT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHCCCCCCCCH
T ss_conf             78999999999999999988605873012888744898765679999998538874010449999999980678899426


Q ss_pred             CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCHHHCC
Q ss_conf             889999999621884226789999999966516489989472840331768519
Q gi|254780383|r  174 TPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ  227 (227)
Q Consensus       174 ~~~~~~~~l~~~~p~~~~~~~~~~li~~G~~iC~~~~P~C~~C~l~~~C~~~k~  227 (227)
                      +..++...+..++|++.|.+||++||+||+.||++++|+|+.|||++.|+||+|
T Consensus       165 ~~~~l~~~~~~l~p~~~~~~~~~~l~~~G~~vC~~~~P~C~~Cpl~~~C~~y~k  218 (221)
T 1kea_A          165 NHKALWELAETLVPGGKCRDFNLGLMDFSAIICAPRKPKCEKCGMSKLCSYYEK  218 (221)
T ss_dssp             TSHHHHHHHHHHSCTTCHHHHHHHHHHHHHHTSCSSSCCGGGCTTTTTCHHHHT
T ss_pred             HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             799999999862880329999999999968870388999988988010847277