HHsearch results for GI: 254780383 and protein with PDBid: 1kg2_A
>1kg2_A A/G-specific adenine glycosylase; DNA repair, hydrolase; 1.20A {Escherichia coli} SCOP: a.96.1.2 PDB: 1kg3_A 1muy_A 1kg6_A 1kg5_A 1mun_A 1mud_A 1kg4_A 1weg_A 1wei_A* 1wef_A* 1kg7_A 1kqj_A
Probab=100.00 E-value=0 Score=385.34 Aligned_cols=200 Identities=18% Similarity=0.243 Sum_probs=178.9
Q ss_pred HHHHHHHHHCCC-CCC---CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHH
Q ss_conf 999999997679-998---7777868999999999633320356799899873176200010126899999999730037
Q gi|254780383|r 27 EIFYLFSLKWPS-PKG---ELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYR 102 (227)
Q Consensus 27 ~I~~~L~~~yp~-~~~---~l~~~~p~~~LVa~iLs~qT~d~~v~~~~~~L~~~ypt~e~l~~a~~~el~~~ir~~G~~~ 102 (227)
.....|..||.. .+. |+..+|||++||++||||||+|++|++++++||++||||++|+.+++++|+++|+++|||+
T Consensus 5 ~~~~~ll~wy~~~~~~~lPWr~~~~p~~vlV~~iLsqqT~~~~v~~~~~~l~~~~~t~~~la~a~~~el~~~i~~~gy~~ 84 (225)
T 1kg2_A 5 QFSAQVLDWYDKYGRKTLPWQIDKTPYKVWLSEVMLQQTQVATVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLGYYA 84 (225)
T ss_dssp HHHHHHHHHHHHHCCCCSGGGSSCCHHHHHHHHHHHTSSCHHHHHHHHHHHHHHCSSHHHHHHSCHHHHHHHHTTSCCTH
T ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHCCCCHH
T ss_conf 99999999999829987999999986999999999732859999999999999878999997228999999986167327
Q ss_pred HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC-CHHHHHH-
Q ss_conf 99999975235544420010000145677764323588889999875421000121046787765654078-8899999-
Q gi|254780383|r 103 KKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQ- 180 (227)
Q Consensus 103 ~KAk~I~~~a~~i~~~~~g~vP~~~~~L~~LpGVG~ktA~~il~~~~~~p~~~VDthv~Rv~~Rlgl~~~~-~~~~~~~- 180 (227)
||++|+++++.++++|+|.+|.++++|++|||||+|||++||+|+||+|+|+|||||+||++|+|+..+. +....+.
T Consensus 85 -ka~~l~~~a~~i~~~~~g~~p~~~~~L~~LpGVG~kTA~~il~~a~~~p~~~VDt~v~Rv~~Rl~~~~~~~~~~~~~~~ 163 (225)
T 1kg2_A 85 -RARNLHKAAQQVATLHGGKFPETFEEVAALPGVGRSTAGAILSLSLGKHFPILDGNVKRVLARCYAVSGWPGKKEVENK 163 (225)
T ss_dssp -HHHHHHHHHHHHHHHSTTSCCCSHHHHHTSTTCCHHHHHHHHHHHHCCSCCCCCHHHHHHHHHHHTCCSCTTSHHHHHH
T ss_pred -HHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHEEHHCCCCCCCCCHHHHHHH
T ss_conf -7999999999999870799974299997589874789999999852986163288755400002156689972689999
Q ss_pred ---HHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCHHHCC
Q ss_conf ---99621884226789999999966516489989472840331768519
Q gi|254780383|r 181 ---SLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227 (227)
Q Consensus 181 ---~l~~~~p~~~~~~~~~~li~~G~~iC~~~~P~C~~C~l~~~C~~~k~ 227 (227)
.+..++|.+.|.++|++||+||+.||++++|+|+.|||++.|+||++
T Consensus 164 l~~~~~~~~p~~~~~~~~~~lv~~G~~iC~~~~P~C~~Cpl~~~C~~~~~ 213 (225)
T 1kg2_A 164 LWSLSEQVTPAVGVERFNQAMMDLGAMICTRSKPKCSLCPLQNGCIAAAN 213 (225)
T ss_dssp HHHHHHHHCCSTTHHHHHHHHHHHHHHTSCSSSCCGGGCTTTTTCHHHHH
T ss_pred HHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCHHHHC
T ss_conf 99987513860000177799999978881599999998978222978765