HHsearch results for GI: 254780383 and protein with PDBid: 1mpg_A

>1mpg_A ALKA, 3-methyladenine DNA glycosylase II; DNA repair, base excision, methylation, hydrolase; 1.80A {Escherichia coli} SCOP: a.96.1.3 d.129.1.2 PDB: 1diz_A 1pvs_A* 3cvs_A* 3cvt_A* 3cw7_A* 3cwa_A* 3cws_A* 3cwt_A* 3cwu_A* 3d4v_A*
Probab=99.72  E-value=8.9e-17  Score=132.19  Aligned_cols=150  Identities=21%  Similarity=0.251  Sum_probs=113.4

Q ss_pred             HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHC-------------CCCCHHHCCCCHHHHHH
Q ss_conf             99999999767999877778689999999996333203567998998731-------------76200010126899999
Q gi|254780383|r   27 EIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEI-------------ADTPQKMLAIGEKKLQN   93 (227)
Q Consensus        27 ~I~~~L~~~yp~~~~~l~~~~p~~~LVa~iLs~qT~d~~v~~~~~~L~~~-------------ypt~e~l~~a~~~el~~   93 (227)
                      ..+..+...+|..+-+-.+ |||+.||.+|++||.+......++.+|.++             ||||+.++.++.++|  
T Consensus        93 ~~L~~l~~~~pGlR~p~~~-d~fE~lvraIlgQQvS~~aA~~i~~rL~~~~G~~~~~~~~~~~fPtp~~la~~~~~~L--  169 (282)
T 1mpg_A           93 GALGRLGAARPGLRLPGCV-DAFEQGVRAILGQLVSVAMAAKLTARVAQLYGERLDDFPEYICFPTPQRLAAADPQAL--  169 (282)
T ss_dssp             HHHGGGGTTCTTCCCCCCS-CHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHCCBCSSCTTCBCCCCHHHHHTCCHHHH--
T ss_pred             HHHHHHHHHCCCCCCCCCC-CHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCHHHH--
T ss_conf             8988899868997688999-9999999999827451999999999999986887776765457777999974999999--


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHH-C----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHC-CCHHHHHHHH
Q ss_conf             99973003799999975235544420-0----10000145677764323588889999875421-0001-2104678776
Q gi|254780383|r   94 YIRTIGIYRKKSENIISLSHILINEF-D----NKIPQTLEGLTRLPGIGRKGANVILSMAFGIP-TIGV-DTHIFRISNR  166 (227)
Q Consensus        94 ~ir~~G~~~~KAk~I~~~a~~i~~~~-~----g~vP~~~~~L~~LpGVG~ktA~~il~~~~~~p-~~~V-Dthv~Rv~~R  166 (227)
                        +.+|+..+|+++|+++|+.+.+.- +    ....+.++.|++|||||++||++|+++++|+| +||+ |.++.|-+.+
T Consensus       170 --r~~Gls~~ka~~i~~lA~~~~~g~l~~~~~~~~ee~~~~L~~l~GIGpWTA~~vll~~lg~~D~fp~~Dl~l~~~~~~  247 (282)
T 1mpg_A          170 --KALGMPLKRAEALIHLANAALEGTLPMTIPGDVEQAMKTLQTFPGIGRWTANYFALRGWQAKDVFLPDDYLIKQRFPG  247 (282)
T ss_dssp             --HHTTSCHHHHHHHHHHHHHHHHTCSCSSCCSCHHHHHHHHTTSTTCCHHHHHHHHHHHSCCSSCCCTTCHHHHHHSTT
T ss_pred             --HHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
T ss_conf             --654886047999999999997498421343688999999997679886999999999769988387434999987410


Q ss_pred             HHHHCCCCHHHHHHHHHHCCC
Q ss_conf             565407888999999962188
Q gi|254780383|r  167 IGLAPGKTPNKVEQSLLRIIP  187 (227)
Q Consensus       167 lgl~~~~~~~~~~~~l~~~~p  187 (227)
                      +      ++.+++...+.+-|
T Consensus       248 l------~~~~~~~~ae~w~P  262 (282)
T 1mpg_A          248 M------TPAQIRRYAERWKP  262 (282)
T ss_dssp             C------CHHHHHHHHGGGTT
T ss_pred             C------CHHHHHHHHHHCCC
T ss_conf             8------99999999985569