HHsearch results for GI: 254780383 and protein with PDBid: 3bz1_U
>3bz1_U Photosystem II 12 kDa extrinsic protein; electron transport photosystem, membrane complex, transmembrane alpha-helix; HET: CLA PHO HEM PL9 BCR DGD LHG SQD LMG LMT; 2.90A {Thermosynechococcus elongatus} PDB: 2axt_U* 3bz2_U* 3kzi_U* 3a0b_U* 3a0h_U*
Probab=93.35 E-value=0.029 Score=34.46 Aligned_cols=77 Identities=14% Similarity=0.227 Sum_probs=51.8
Q ss_pred HCCCHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
Q ss_conf 33320356799899873176200010126899999999730037999999752355444200100001456777643235
Q gi|254780383|r 59 AQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138 (227)
Q Consensus 59 ~qT~d~~v~~~~~~L~~~ypt~e~l~~a~~~el~~~ir~~G~~~~KAk~I~~~a~~i~~~~~g~vP~~~~~L~~LpGVG~ 138 (227)
+.+.++.++.+-..+-..+...-++=.|+.++|..+ -|+...+|++|++ + |.. .+.++|++++|||+
T Consensus 3 a~~~~~~~~~~~~~~~~~~~~kidlN~As~~eL~~l---pGig~~~A~~Iv~--------~-gpf-~s~~dL~~V~Gig~ 69 (104)
T 3bz1_U 3 ASTEEELVNVVDEKLGTAYGEKIDLNNTNIAAFIQY---RGLYPTLAKLIVK--------N-APY-ESVEDVLNIPGLTE 69 (104)
T ss_dssp -----CCCCHHHHHTTSSBTTBEETTSSCGGGGGGS---TTTTHHHHHHHHH--------S-CCC-SSGGGGGGCTTCCH
T ss_pred CCHHHHHHHHHHHHHHCCCCCCEECCCCCHHHHHHC---CCCCHHHHHHHHH--------C-CCC-CCHHHHHCCCCCCH
T ss_conf 213566642566655304688357840899999658---9979999999997--------4-997-98999963899899
Q ss_pred HHHHHHHHHH
Q ss_conf 8888999987
Q gi|254780383|r 139 KGANVILSMA 148 (227)
Q Consensus 139 ktA~~il~~~ 148 (227)
++...+-.|.
T Consensus 70 ~~~e~ik~yl 79 (104)
T 3bz1_U 70 RQKQILRENL 79 (104)
T ss_dssp HHHHHHHHHG
T ss_pred HHHHHHHHHH
T ss_conf 9999999865