HHsearch results for GI: 254780383 and protein with PDBid: 3fhf_A
>3fhf_A Mjogg, N-glycosylase/DNA lyase, DNA-; helix-hairpin-helix, 8-oxoguanine, 8-OXOG, DNA damage, DNA repair, glycosidase, hydrolase; 2.00A {Methanocaldococcus jannaschii} PDB: 3knt_A*
Probab=100.00 E-value=2.3e-32 Score=237.22 Aligned_cols=173 Identities=20% Similarity=0.236 Sum_probs=137.5
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHH--HH
Q ss_conf 9999999999976799987777868999999999633320356799899873176200010126899999999730--03
Q gi|254780383|r 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIG--IY 101 (227)
Q Consensus 24 ~~~~I~~~L~~~yp~~~~~l~~~~p~~~LVa~iLs~qT~d~~v~~~~~~L~~~ypt~e~l~~a~~~el~~~ir~~G--~~ 101 (227)
++.++...+.+.|+... +....|||+.||++||||||+|+++.+++++| ++.++.++.++|+++|+++| ||
T Consensus 21 ~~~~~i~~~~~~f~~~~-~~~~~~~F~~Lv~~ILsqqt~~~~~~~~~~~l------~e~~~~~~~eel~~~ik~~G~~f~ 93 (214)
T 3fhf_A 21 EIKDIIDKRIQEFKSFK-NKSNEEWFKELCFCILTANFTAEGGIRIQKEI------GDGFLTLPREELEEKLKNLGHRFY 93 (214)
T ss_dssp THHHHHHHHHHHHHGGG-GSCHHHHHHHHHHHHHHTTSCHHHHHHHHHHH------TTHHHHSCHHHHHHHHHHTTCTTH
T ss_pred HHHHHHHHHHHHHCCCC-CCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHH------HHHHHCCCHHHHHHHHHHHCCHHH
T ss_conf 89999999999851567-76548889999999973657399999999999------999986999999999999464567
Q ss_pred HHHHHHHHHHHHH-----HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC---
Q ss_conf 7999999752355-----44420010000145677764323588889999875421000121046787765654078---
Q gi|254780383|r 102 RKKSENIISLSHI-----LINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK--- 173 (227)
Q Consensus 102 ~~KAk~I~~~a~~-----i~~~~~g~vP~~~~~L~~LpGVG~ktA~~il~~~~~~p~~~VDthv~Rv~~Rlgl~~~~--- 173 (227)
++||++|+++++. +.+.|+|.+|.+.++|++|||||+|||++||++++++|+++||+||+|+++|+|+.+..
T Consensus 94 ~~KAk~I~~~a~~~~~~~l~~~~~~~~~~~~~~L~~l~GIG~ktA~~~L~~~~~~~~~ivD~hv~Ri~~rlg~~~~~~k~ 173 (214)
T 3fhf_A 94 RKRAEYIVLARRFKNIKDIVESFENEKVAREFLVRNIKGIGYKEASHFLRNVGYDDVAIIDRHILRELYENNYIDEIPKT 173 (214)
T ss_dssp HHHHHHHHHHGGGCCHHHHHHHSSSHHHHHHHHHHHSTTCCHHHHHHHHHHTTCCSCCCCCHHHHHHHHHTTSSSSCCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCC
T ss_conf 99999999999999998888973998987399997488876999999999976998631327999999993887777764
Q ss_pred ----CHHHHHHHHHHCCCH----HHHHHHHHHHHHHHH
Q ss_conf ----889999999621884----226789999999966
Q gi|254780383|r 174 ----TPNKVEQSLLRIIPP----KHQYNAHYWLVLHGR 203 (227)
Q Consensus 174 ----~~~~~~~~l~~~~p~----~~~~~~~~~li~~G~ 203 (227)
.+.+++..|.++-+. .-..|+..|.+..|+
T Consensus 174 ~t~k~y~~~e~~l~~~~~~~~~~~~~lDlylW~~~~g~ 211 (214)
T 3fhf_A 174 LSRRKYLEIENILRDIGEEVNLKLSELDLYIWYLRTGK 211 (214)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHSC
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC
T ss_conf 21647999999999777637999899899999998093