HHsearch results for GI: 254780383 and protein with PDBid: 3fsp_A

>3fsp_A A/G-specific adenine glycosylase; protein-DNA complex, DNA glycosylase, transition state analog, DNA repair; HET: NRI; 2.20A {Geobacillus stearothermophilus} PDB: 3fsq_A* 1rrs_A* 1vrl_A* 1rrq_A* 3g0q_A*
Probab=100.00  E-value=0  Score=394.10  Aligned_cols=202  Identities=19%  Similarity=0.352  Sum_probs=185.8

Q ss_pred             HHHHHHHHHHHCCCCCCCCCC---CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHH
Q ss_conf             999999999976799987777---86899999999963332035679989987317620001012689999999973003
Q gi|254780383|r   25 LEEIFYLFSLKWPSPKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIY  101 (227)
Q Consensus        25 ~~~I~~~L~~~yp~~~~~l~~---~~p~~~LVa~iLs~qT~d~~v~~~~~~L~~~ypt~e~l~~a~~~el~~~ir~~G~~  101 (227)
                      .+++...|.+||......|+|   .|||++|||+||||||+|++|.+++++|+++|||+++|++|+++||+++|+++|||
T Consensus        13 ~~~~~~~ll~wy~~~~r~lpWr~~~~py~vlvseil~qqT~~~~v~~~~~~~~~~~pt~~~la~a~~~ev~~~~~~lGyy   92 (369)
T 3fsp_A           13 AREFQRDLLDWFARERRDLPWRKDRDPYKVWVSEVMLQQTRVETVIPYFEQFIDRFPTLEALADADEDEVLKAWEGLGYY   92 (369)
T ss_dssp             HHHHHHHHHHHHHHHCCCCGGGSCCCHHHHHHHHHHTTTSCHHHHHHHHHHHHHHCCSHHHHHTSCHHHHHHTTTTSSCT
T ss_pred             HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHCCHH
T ss_conf             99999999999984698899898998799999999861087889999999999977899999778999999998746889


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC-C----HH
Q ss_conf             799999975235544420010000145677764323588889999875421000121046787765654078-8----89
Q gi|254780383|r  102 RKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-T----PN  176 (227)
Q Consensus       102 ~~KAk~I~~~a~~i~~~~~g~vP~~~~~L~~LpGVG~ktA~~il~~~~~~p~~~VDthv~Rv~~Rlgl~~~~-~----~~  176 (227)
                      + ||++|+++|++|+++|+|.+|.++++|++|||||+|||++||+++||+|+++||+||+||++|+|...+. +    ..
T Consensus        93 ~-ra~~l~~~a~~i~~~~~g~~P~~~~~L~~LpGVG~~TA~ail~~a~~~~~~~vD~nv~Rv~~R~~~~~~~~~~~~~~~  171 (369)
T 3fsp_A           93 S-RVRNLHAAVKEVKTRYGGKVPDDPDEFSRLKGVGPYTVGAVLSLAYGVPEPAVDGNVMRVLSRLFLVTDDIAKPSTRK  171 (369)
T ss_dssp             H-HHHHHHHHHHHHHHHHTTCCCCSHHHHHTSTTCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHTTCCSCTTSHHHHH
T ss_pred             H-HHHHHHHCCCCEEECCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHCCCCCCCCCCHHHH
T ss_conf             9-999998521227600489999879998524225889999999986148861224851356754304468887511467


Q ss_pred             HHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCHHHCC
Q ss_conf             999999621884226789999999966516489989472840331768519
Q gi|254780383|r  177 KVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ  227 (227)
Q Consensus       177 ~~~~~l~~~~p~~~~~~~~~~li~~G~~iC~~~~P~C~~C~l~~~C~~~k~  227 (227)
                      .++..+..++|.+.|.++|++||+||+.||++++|+|+.|||++.|.+|++
T Consensus       172 ~~~~~~~~~~~~~~~~~~nqalmdlG~~iC~~~~P~C~~CPl~~~C~~~~~  222 (369)
T 3fsp_A          172 RFEQIVREIMAYENPGAFNEALIELGALVCTPRRPSCLLCPVQAYCQAFAE  222 (369)
T ss_dssp             HHHHHHHHHCCSSSHHHHHHHHHHHHHHTSCSSSCCTTTCTTGGGCHHHHH
T ss_pred             HHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCHHHCC
T ss_conf             788753035876775688999999756415689998988985332776527