HHsearch results for GI: 254780383 and protein with PDBid: 3n5n_X

>3n5n_X A/G-specific adenine DNA glycosylase; alpha-helices, helix-hairpin-helix motif, iron-sulfur cluste hydrolase; 2.30A {Homo sapiens}
Probab=100.00  E-value=0  Score=387.79  Aligned_cols=209  Identities=19%  Similarity=0.305  Sum_probs=187.8

Q ss_pred             HCCCHHHHHHHHHHHHHHCCCCCCCCCCC-----------CHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHCCC
Q ss_conf             23998999999999999767999877778-----------6899999999963332035679989987317620001012
Q gi|254780383|r   18 CLYTPKELEEIFYLFSLKWPSPKGELYYV-----------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI   86 (227)
Q Consensus        18 ~~~~~~~~~~I~~~L~~~yp~~~~~l~~~-----------~p~~~LVa~iLs~qT~d~~v~~~~~~L~~~ypt~e~l~~a   86 (227)
                      ......++..+...|..||...+.+|+|+           |||++|||+||||||++++|+.++++|+++|||+++|++|
T Consensus         8 ~~~~~~~~~~~~~~Ll~Wy~~~~R~lPWR~~~~~~~~~~~~py~vlvseimlqQT~~~~V~~~~~~~~~r~Pt~~~LA~A   87 (287)
T 3n5n_X            8 LFRDVAEVTAFRGSLLSWYDQEKRDLPWRRRAEDEMDLDRRAYAVWVSEVMLQQTQVATVINYYTGWMQKWPTLQDLASA   87 (287)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCSHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCCSHHHHHTS
T ss_pred             CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHCC
T ss_conf             22888999999999999999669989988588765666788789999999981186999999999999987799999767


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
Q ss_conf             689999999973003799999975235544420010000145677-7643235888899998754210001210467877
Q gi|254780383|r   87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLT-RLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN  165 (227)
Q Consensus        87 ~~~el~~~ir~~G~~~~KAk~I~~~a~~i~~~~~g~vP~~~~~L~-~LpGVG~ktA~~il~~~~~~p~~~VDthv~Rv~~  165 (227)
                      ++++|+++|+++|||+ ||++|+++|+.|+++|+|.+|.+..+++ +|||||+|||++||+++||+|+++|||||+||++
T Consensus        88 ~~~ev~~~~~glGyy~-ra~~l~~~a~~i~~~~~g~~p~~~~e~l~~LPGVG~kTA~aIl~~af~~~~~~VDtnV~RV~~  166 (287)
T 3n5n_X           88 SLEEVNQLWAGLGYYS-RGRRLQEGARKVVEELGGHMPRTAETLQQLLPGVGRYTAGAIASIAFGQATGVVDGNVARVLC  166 (287)
T ss_dssp             CHHHHHHHHTTSSCHH-HHHHHHHHHHHHHHHSTTCCCSSHHHHHHHSTTCCHHHHHHHHHHHSCCCCCCCCHHHHHHHH
T ss_pred             CHHHHHHHHHHCCHHH-HHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHCEEEEECCCCCCEEE
T ss_conf             9999999998563899-999999999888898479887621544046887568999999998830400011487001355


Q ss_pred             HHHHHCCC-CHH----HHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCHHHCC
Q ss_conf             65654078-889----999999621884226789999999966516489989472840331768519
Q gi|254780383|r  166 RIGLAPGK-TPN----KVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ  227 (227)
Q Consensus       166 Rlgl~~~~-~~~----~~~~~l~~~~p~~~~~~~~~~li~~G~~iC~~~~P~C~~C~l~~~C~~~k~  227 (227)
                      |+|+...+ +..    ++...+.+++|.+.+.+||++||+||+.||++++|+|+.|||++.|.+|++
T Consensus       167 Rl~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~n~alm~lG~~iC~~~~P~C~~Cpl~~~C~~~~~  233 (287)
T 3n5n_X          167 RVRAIGADPSSTLVSQQLWGLAQQLVDPARPGDFNQAAMELGATVCTPQRPLCSQCPVESLCRARQR  233 (287)
T ss_dssp             HHTTCCSCTTSHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHTSCSSSCCTTSCTTGGGCHHHHH
T ss_pred             EECCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHC
T ss_conf             6522267655440256677665404874443199999999878860779998888976114855652