HHSEARCH alignment of GI: 254780383 and SCOP domain: d1cuka2

Alignment
>d1cuka2 a.60.2.1 (A:65-142) DNA helicase RuvA subunit, middle domain {Escherichia coli [TaxId: 562]}
Probab=92.49  E-value=0.091  Score=29.51  Aligned_cols=27  Identities=30%  Similarity=0.507  Sum_probs=19.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             014567776432358888999987542
Q gi|254780383|r  125 QTLEGLTRLPGIGRKGANVILSMAFGI  151 (227)
Q Consensus       125 ~~~~~L~~LpGVG~ktA~~il~~~~~~  151 (227)
                      .|.+.|.++||||+|||.-|....-++
T Consensus        41 ~D~~~L~~vpGIG~KtA~rIi~eLk~K   67 (78)
T d1cuka2          41 EEVGALVKLPGIGKKTAERLIVEMKDR   67 (78)
T ss_dssp             TCHHHHHTSTTCCHHHHHHHHHHHHHH
T ss_pred             CCHHHHHCCCCCCHHHHHHHHHHHHHH
T ss_conf             688871229997899999999999999


SCOP domain information

class: All alpha proteins
fold: SAM domain-like
superfamily: RuvA domain 2-like
family: DNA helicase RuvA subunit, middle domain
domain: DNA helicase RuvA subunit, middle domain
species: Escherichia coli [TaxId: 562]