HHSEARCH alignment of GI: 254780383 and SCOP domain: d2noha1

Alignment
>d2noha1 a.96.1.3 (A:136-325) 8-oxoguanine glycosylase {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.91  E-value=2.3e-24  Score=181.68  Aligned_cols=122  Identities=18%  Similarity=0.317  Sum_probs=106.4

Q ss_pred             CHHHHHHHHHHHHCCCHHHHHHHHHHHHHC---------------CCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             689999999996333203567998998731---------------76200010126899999999730037999999752
Q gi|254780383|r   47 NHFTLIVAVLLSAQSTDVNVNKATKHLFEI---------------ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISL  111 (227)
Q Consensus        47 ~p~~~LVa~iLs~qT~d~~v~~~~~~L~~~---------------ypt~e~l~~a~~~el~~~ir~~G~~~~KAk~I~~~  111 (227)
                      |||+.||++|+|||+++.++.++..+|.++               ||||++++.++++++   ++..|+. .||++|+++
T Consensus         1 DPfe~lv~~IisQq~s~~~~~~~~~~L~~~~G~~~~~~~~~~~~~FP~~~~la~~~~e~~---l~~~~~~-~ra~~i~~~   76 (190)
T d2noha1           1 DPIECLFSFICSSNNNIARITGMVERLCQAFGPRLIQLDDVTYHGFPSLQALAGPEVEAH---LRKLGLG-YRARYVSAS   76 (190)
T ss_dssp             CHHHHHHHHHTTTTSCHHHHHHHHHHHHHHHSCEEEEETTEEEECCCCHHHHHSTTHHHH---HHHTTCT-THHHHHHHH
T ss_pred             CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCHHHHHHCCHHHH---HHHCCHH-HHHHHHHHH
T ss_conf             969999999998400799999999999999787756667502330299999987666989---9856348-999999999


Q ss_pred             HHHHHHHHCCC----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHCCCHHHHHHHHH-HHHCC
Q ss_conf             35544420010----------000145677764323588889999875421-000121046787765-65407
Q gi|254780383|r  112 SHILINEFDNK----------IPQTLEGLTRLPGIGRKGANVILSMAFGIP-TIGVDTHIFRISNRI-GLAPG  172 (227)
Q Consensus       112 a~~i~~~~~g~----------vP~~~~~L~~LpGVG~ktA~~il~~~~~~p-~~~VDthv~Rv~~Rl-gl~~~  172 (227)
                      |+.+.++++|.          .|+.+++|++|||||++||++||+|++|+| +||||+||+|++.|+ |+.+.
T Consensus        77 a~~i~~~~~~~~~l~~l~~~~~~~~~~~L~~l~GIG~wTA~~il~~~~~~~d~fpvD~~v~R~~~r~~~~~~~  149 (190)
T d2noha1          77 ARAILEEQGGLAWLQQLRESSYEEAHKALCILPGVGTQVADCICLMALDKPQAVPVDVHMWHIAQRDYSWHPT  149 (190)
T ss_dssp             HHHHHHTSCSHHHHHHTTTSCHHHHHHHHTTSTTCCHHHHHHHHHHHSCCTTCCCCCHHHHHHHHHHHCCCCS
T ss_pred             HHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHCCCCC
T ss_conf             9999873012368898637994799999987677518999999999769998675449999999998245676


SCOP domain information

class: All alpha proteins
fold: DNA-glycosylase
superfamily: DNA-glycosylase
family: DNA repair glycosylase, 2 C-terminal domains
domain: 8-oxoguanine glycosylase
species: Human (Homo sapiens) [TaxId: 9606]