RPSBLAST alignment for GI: 254780383 and conserved domain: smart00478
>gnl|CDD|128754 smart00478, ENDO3c, endonuclease III. includes endonuclease III (DNA-(apurinic or apyrimidinic site) lyase), alkylbase DNA glycosidases (Alka-family) and other DNA glycosidases. Length = 149
Score = 161 bits (409), Expect = 2e-40
Identities = 64/149 (42%), Positives = 96/149 (64%), Gaps = 1/149 (0%)
Query: 57 LSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILI 116
LS Q++D VNKAT+ LFE TP+ + A E++L+ IR +G YR+K++ +I L+ IL+
Sbjct: 1 LSQQTSDEAVNKATERLFEKFPTPEDLAAADEEELEELIRPLGFYRRKAKYLIELARILV 60
Query: 117 NEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TP 175
E+ ++P E L +LPG+GRK AN +LS A G P I VDTH+ RI+ R+GL K TP
Sbjct: 61 EEYGGEVPDDREELLKLPGVGRKTANAVLSFALGKPFIPVDTHVLRIAKRLGLVDKKSTP 120
Query: 176 NKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
+VE+ L +++P + + L+ GR
Sbjct: 121 EEVEKLLEKLLPKEDWRELNLLLIDFGRT 149