RPSBLAST alignment of GI: 254780383 and protein with PDBid: 1pu6

>1pu6_A 3-methyladenine DNA glycosylase; helix-hairpin-helix, base excision repair, hydrolase; HET: KCX; 1.64A {Helicobacter pylori} SCOP: a.96.1.5 PDB: 1pu7_A* 1pu8_A* Length = 218
 Score =  142 bits (359), Expect = 6e-35
 Identities = 33/190 (17%), Positives = 72/190 (37%), Gaps = 28/190 (14%)

Query: 47  NHFTLIVAVLLSAQSTDVNVNKATKHLFEI-------ADTPQKMLAIGEKKLQNYIRTIG 99
             F  ++  +L+  +    V K+ ++L              +K+  I   KL   +R  G
Sbjct: 29  LKFEALLGAVLTQNTKFEAVLKSLENLKNAFILENDDEINLKKIAYIEFSKLAECVRPSG 88

Query: 100 IYRKKSENIISLSHILINEFDN----KIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG 155
            Y +K++ +I LS  ++ +F +    K   T E L    GIG++ A+ IL  A     + 
Sbjct: 89  FYNQKAKRLIDLSGNILKDFQSFENFKQEVTREWLLDQKGIGKESADAILCYACAKEVMV 148

Query: 156 VDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNA----------------HYWLV 199
           VD + +    ++G+   +  ++++    + +                        H  +V
Sbjct: 149 VDKYSYLFLKKLGIEI-EDYDELQHFFEKGVQENLNSALALYENTISLAQLYARFHGKIV 207

Query: 200 LHGRYVCKAR 209
              +   + +
Sbjct: 208 EFSKQKLELK 217