RPSBLAST alignment of GI: 254780383 and protein with PDBid: 3n5n

>3n5n_X A/G-specific adenine DNA glycosylase; alpha-helices, helix-hairpin-helix motif, iron-sulfur cluste hydrolase; 2.30A {Homo sapiens} Length = 287
 Score =  132 bits (333), Expect = 7e-32
 Identities = 34/198 (17%), Positives = 71/198 (35%), Gaps = 7/198 (3%)

Query: 33  SLKW--PSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK 90
            L W   +          + + V+ ++  Q+    V        +   T Q + +   ++
Sbjct: 32  DLPWRRRAEDEMDLDRRAYAVWVSEVMLQQTQVATVINYYTGWMQKWPTLQDLASASLEE 91

Query: 91  LQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFG 150
           +      +G Y +          ++     +           LPG+GR  A  I S+AFG
Sbjct: 92  VNQLWAGLGYYSRGRRLQEGARKVVEELGGHMPRTAETLQQLLPGVGRYTAGAIASIAFG 151

Query: 151 IPTIGVDTHIFRISNRIGLAPGKTPNKVEQS-----LLRIIPPKHQYNAHYWLVLHGRYV 205
             T  VD ++ R+  R+        + +          +++ P    + +   +  G  V
Sbjct: 152 QATGVVDGNVARVLCRVRAIGADPSSTLVSQQLWGLAQQLVDPARPGDFNQAAMELGATV 211

Query: 206 CKARKPQCQSCIISNLCK 223
           C  ++P C  C + +LC+
Sbjct: 212 CTPQRPLCSQCPVESLCR 229