RPSBLAST alignment of GI: 254780383 and SCOP domain: d2abka_

Alignment

 Score =  130 bits (327), Expect = 1e-31
 Identities = 99/203 (48%), Positives = 139/203 (68%)

Query: 21  TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
              +  EI        P P  EL + + F L++AVLLSAQ+TDV+VNKAT  L+ +A+TP
Sbjct: 2   NKAKRLEILTRLRENNPHPTTELNFSSPFELLIAVLLSAQATDVSVNKATAKLYPVANTP 61

Query: 81  QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
             ML +G + ++ YI+TIG+Y  K+ENII    IL+ + + ++P+    L  LPG+GRK 
Sbjct: 62  AAMLELGVEGVKTYIKTIGLYNSKAENIIKTCRILLEQHNGEVPEDRAALEALPGVGRKT 121

Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
           ANV+L+ AFG PTI VDTHIFR+ NR   APGK   +VE+ LL+++P + + + H+WL+L
Sbjct: 122 ANVVLNTAFGWPTIAVDTHIFRVCNRTQFAPGKNVEQVEEKLLKVVPAEFKVDCHHWLIL 181

Query: 201 HGRYVCKARKPQCQSCIISNLCK 223
           HGRY C ARKP+C SCII +LC+
Sbjct: 182 HGRYTCIARKPRCGSCIIEDLCE 204

SCOP domain information

class: All alpha proteins
fold: DNA-glycosylase
superfamily: DNA-glycosylase
family: Endonuclease III
domain: Endonuclease III
species: Escherichia coli [TaxId: 562]