HHsearch alignment for GI: 254780384 and conserved domain: cd04279
>cd04279 ZnMc_MMP_like_1 Zinc-dependent metalloprotease; MMP_like sub-family 1. A group of bacterial, archaeal, and fungal metalloproteinase domains similar to matrix metalloproteinases and astacin.
Probab=99.67 E-value=2.5e-16 Score=115.95 Aligned_cols=125 Identities=22% Similarity=0.199 Sum_probs=76.4
Q ss_pred CHHHHHHHHHHHHHHHHHHCCEEEEECC---CCCEEEECCC----------CEEEEECCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 9999999999999886574756898247---8716896158----------53566314677531224433544333666
Q gi|254780384|r 48 NPNAQEVARWALGEWSKVVDLTFEETSI---HSDIKFISSN----------NGYVCTPRYDSRYFMEINFDKADVWRYGI 114 (665)
Q Consensus 48 ~~~~~~~~R~Al~~ws~va~ItF~Ev~~---~~d~~f~~~~----------~g~a~~p~~~~~~~~~~~~~~~~~~~~~~ 114 (665)
T Consensus 19 ~~~~~~Ai~~A~~~Ws~v~~L~Fve~~~~~~~adI~I~f~~~~~~~g~gg~lA~a~~p~~~~~~~~~~~~~~~~~~~~~~ 98 (156)
T cd04279 19 AQSWLQAVKQAAAEWENVGPLKFVYNPEEDNDADIVIFFDRPPPVGGAGGGLARAGFPLISDGNRKLFNRTDINLGPGQP 98 (156)
T ss_pred HHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCCEEECCCCCCCCCCCCCCEEEEEECCCCC
T ss_conf 99999999999999856389369982477777876999658999889898686716898887776655011442011688
Q ss_pred CCCCEEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCEECCHHHHHHHHHHHH
Q ss_conf 66734663003234655187888876667666677754101420244675235677666655200021122148999986
Q gi|254780384|r 115 GKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194 (665)
Q Consensus 115 ~~g~y~~~t~iHEIGHALGL~Hp~~~~~g~~~~~~~~~~~~d~~~~TvMSY~~~~~~~~~~~~~~~~tpm~~DI~Alq~l 194 (665)
T Consensus 99 ~~~~~l~~vA~HEiGHaLGL~Hss~~------------------~~aiM~P~y~~~------~~~~~~L~~dDi~gIq~l 154 (156)
T cd04279 99 RGAENLQAIALHELGHALGLWHHSDR------------------PEDAMYPSQGQG------PDGNPTLSARDVATLKRL 154 (156)
T ss_pred CCCHHHHHHHHHHHCCCCCCCCCCCC------------------CCCEEEEEECCC------CCCCCCCCHHHHHHHHHH
T ss_conf 66020999999986010144667899------------------666663252157------777898998999999997
Q ss_pred CC
Q ss_conf 08
Q gi|254780384|r 195 YG 196 (665)
Q Consensus 195 YG 196 (665)
T Consensus 155 Yg 156 (156)
T cd04279 155 YG 156 (156)
T ss_pred CC
T ss_conf 59