HHsearch alignment for GI: 254780384 and conserved domain: cd04282
>cd04282 ZnMc_meprin Zinc-dependent metalloprotease, meprin_like subfamily. Meprins are membrane-bound or secreted extracellular proteases, which cleave a variety of targets, including peptides such as parathyroid hormone, gastrin, and cholecystokinin, cytokines such as osteopontin, and proteins such as collagen IV, fibronectin, casein and gelatin. Meprins may also be able to release proteins from the cell surface. Closely related meprin alpha- and beta-subunits form homo- and hetero-oligomers; these complexes are found on epithelial cells of the intestine, for example, and are also expressed in certain cancer cells.
Probab=98.67 E-value=2.5e-07 Score=61.70 Aligned_cols=91 Identities=22% Similarity=0.254 Sum_probs=59.8
Q ss_pred EEEEEE-EECCHHHHHHHHHHHHHHHHHHCCEEEEECCCCC-EEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 026887-5079999999999999886574756898247871-68961585356631467753122443354433366666
Q gi|254780384|r 39 RLSFDI-TELNPNAQEVARWALGEWSKVVDLTFEETSIHSD-IKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGK 116 (665)
Q Consensus 39 ~~t~~i-t~l~~~~~~~~R~Al~~ws~va~ItF~Ev~~~~d-~~f~~~~~g~a~~p~~~~~~~~~~~~~~~~~~~~~~~~ 116 (665)
T Consensus 49 ~VPY~i~~~~~~~~~~~I~~Am~~~~~~TCirF~~r~~e~~yi~~~~~~GC~S~VG~~gg~----------Q~--vslg~ 116 (230)
T cd04282 49 PIPYILDDSLDLNAKGVILKAFEMYRLKSCVDFKPYEGESNYIFFFKGSGCWSMVGDQQGG----------QN--LSIGA 116 (230)
T ss_pred CEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEECCCCCCCCCCCCCCE----------EE--EEECC
T ss_conf 1669988879999999999999999858954148678987559995699511422653880----------56--65078
Q ss_pred CCEEEEEHHHHHHHHHCCCCCCCCC
Q ss_conf 7346630032346551878888766
Q gi|254780384|r 117 GTILSHNALHEIGHALGLMHPGSYN 141 (665)
Q Consensus 117 g~y~~~t~iHEIGHALGL~Hp~~~~ 141 (665)
T Consensus 117 gC~~~G~i~HEl~HaLGf~HEqsR~ 141 (230)
T cd04282 117 GCDYKATVEHEFLHALGFYHEQSRS 141 (230)
T ss_pred CCCCCCHHHHHHHHHHCCCCCCCCC
T ss_conf 8787766799999885566542366