HHsearch alignment for GI: 254780384 and conserved domain: pfam08548
>pfam08548 Peptidase_M10_C Peptidase M10 serralysin C terminal. Serralysins are peptidases related to mammalian matrix metallopeptidases (MMPs). The peptidase unit is found at the N terminal while this domain at the C terminal forms a corkscrew and is thought to be important for secretion of the protein through the bacterial cell wall. This domain contains the calcium ion binding domain pfam00353.
Probab=100.00 E-value=2.1e-32 Score=212.98 Aligned_cols=127 Identities=29% Similarity=0.506 Sum_probs=111.3
Q ss_pred CC-CCCCCCCEEECCCCCC---------CCCEEEEEECCCCCEEEEEEECCCCCCEEECCCCCCCEECCCCCCEEEECCC
Q ss_conf 76-6666773463257678---------7635898722897325998504787424744587310103555754773482
Q gi|254780384|r 197 AP-KGSLGNNIYKIEVQQK---------DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266 (665)
Q Consensus 197 an-~~~~gdt~y~~~~~~~---------~~~~~~tI~D~gG~DTid~s~~~~~~~~IdL~~g~~S~~~g~~~n~~Ia~gt 266 (665)
T Consensus 1 an~~Tr~GdtvYgfnsntg~~~~~~~~~~~~~~~tiwD~gG~DTiD~Sg~~~~~-~IdL~~g~~S~vgg~~gN~~Ia~g~ 79 (220)
T pfam08548 1 ANMTTRTGDTVYGFNSNTDRDFYSATSSSDKLIFSVWDAGGNDTFDFSGFSQNQ-RINLNEGSFSDVGGLKGNVSIAAGV 79 (220)
T ss_pred CCCCCCCCCCEECCCCCCCCCEEECCCCCCCEEEEEECCCCCEEECCCCCCCCE-EEECCCCCEECCCCCCCCEEECCCC
T ss_conf 986224788737268889850461367889769999938987848546985460-8966688242145653745432773
Q ss_pred EEEEEECCCCCCEEEECCCCCEEECCCCCCEEECCCCCEEEEEECCCCCEEEEEECCCEE
Q ss_conf 574466177651688266674686678634588888733899823665137872058259
Q gi|254780384|r 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326 (665)
Q Consensus 267 ~IEna~g~~g~D~i~gn~~~n~l~gg~g~d~~~g~~g~Dt~~~~~~~~~~~~~~~~~~~~ 326 (665)
T Consensus 80 ~IEn~~GgsG~D~l~Gn~~~n~L~Gg~G~D~l~Gg~G~D~l~--GG~G~D~f~~~~g~Ds 137 (220)
T pfam08548 80 TIENAIGGSGNDLLIGNDAANILKGGAGNDIIYGGGGADQLW--GGAGKDTFVYGAASDS 137 (220)
T ss_pred EEEEEECCCCCCEEECCCCCCEEECCCCCCEEECCCCCCEEE--CCCCCEEEEECCCCCC
T ss_conf 166886667676898788885578789988687778871898--8998349984076657