HHsearch results for GI: 254780384 and protein with PDBid: 1l6j_A
>1l6j_A Matrix metalloproteinase-9; twisted beta sheet flanked by helices, hydrolase; 2.50A {Homo sapiens} SCOP: a.20.1.2 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2
Probab=99.33 E-value=2e-12 Score=91.12 Aligned_cols=104 Identities=20% Similarity=0.195 Sum_probs=72.1
Q ss_pred CCCCCEEEEEEEE----CC-HHHHHHHHHHHHHHHHHHCCEEEEECC-CCCEEEECCC---------------CEEEEEC
Q ss_conf 6567502688750----79-999999999999886574756898247-8716896158---------------5356631
Q gi|254780384|r 34 VLTTHRLSFDITE----LN-PNAQEVARWALGEWSKVVDLTFEETSI-HSDIKFISSN---------------NGYVCTP 92 (665)
Q Consensus 34 ~~~~~~~t~~it~----l~-~~~~~~~R~Al~~ws~va~ItF~Ev~~-~~d~~f~~~~---------------~g~a~~p 92 (665)
.+....+|+-|.. |. ...+.++|.||+.|++|++|+|+||.. .+||.+.+.. -++|+.|
T Consensus 96 kW~k~~lTy~i~nyt~~l~~~~v~~~i~~AF~~Ws~vtpL~F~ev~~~~ADI~I~F~~g~HgD~~pFDG~gG~LAHAf~P 175 (425)
T 1l6j_A 96 KWHHHNITYWIQNYSEDLPRAVIDDAFARAFALWSAVTPLTFTRVYSRDADIVIQFGVAEHGDGYPFDGKDGLLAHAFPP 175 (425)
T ss_dssp SCCSSEEEEEECCCCTTSCHHHHHHHHHHHHHHHHHTSSCEEEEECSTTSSEEEEEECSSCSSSCCCCSTTSBCEEECCS
T ss_pred CCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCC
T ss_conf 87678843898507999898999999999998774557722786158887868754257789999857999847985179
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCC-----CEEEEEHHHHHHHHHCCCCCCC
Q ss_conf 4677531224433544333666667-----3466300323465518788887
Q gi|254780384|r 93 RYDSRYFMEINFDKADVWRYGIGKG-----TILSHNALHEIGHALGLMHPGS 139 (665)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~g-----~y~~~t~iHEIGHALGL~Hp~~ 139 (665)
..+ ..++..++.+..|..+...+ .-...+++|||||.|||.|..-
T Consensus 176 ~~g--~~Gd~HFD~dE~Wt~~~~~~~~~~~~~~~~va~He~gh~lGl~HS~~ 225 (425)
T 1l6j_A 176 GPG--IQGDAHFDDDELWSLGKGVVVPTRFGNADGAACHFPFIFEGRSYSAC 225 (425)
T ss_dssp SST--TTTCEEEETTSCEESSSSCCCBCBSSSSTTCBCCSSEESSSCEESSC
T ss_pred CCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCEEECCCCCCCC
T ss_conf 989--88745147331341688765321234543213531322058567777