HHsearch results for GI: 254780384 and protein with PDBid: 1rm8_A

>1rm8_A MMP-16, matrix metalloproteinase-16, MT3-MMP; membrane type - matrix metalloproteinase, batimastat, hydroxamate inhibitor, protease, hydrolase; HET: BAT; 1.80A {Homo sapiens} SCOP: d.92.1.11
Probab=99.88  E-value=5.3e-23  Score=154.95  Aligned_cols=143  Identities=30%  Similarity=0.446  Sum_probs=88.0

Q ss_pred             CEEECCCEEEEECCCCCCCEEEEEEEEC-CHHHHHHHHHHHHHHHHHHCCEEEEECCC--------CCEEEECCCC----
Q ss_conf             8354043467505765675026887507-99999999999998865747568982478--------7168961585----
Q gi|254780384|r   20 DQYWSNYFIRYKPDVLTTHRLSFDITEL-NPNAQEVARWALGEWSKVVDLTFEETSIH--------SDIKFISSNN----   86 (665)
Q Consensus        20 ~~~~~~~~~~~~~d~~~~~~~t~~it~l-~~~~~~~~R~Al~~ws~va~ItF~Ev~~~--------~d~~f~~~~~----   86 (665)
                      |..|+...+++++..+.+        .+ .+.+++++|.||+.|++|++|+|+||...        .++.+.....    
T Consensus         1 G~kW~~~~iTy~~~~~~~--------~~~~~~~~~~i~~A~~~W~~~~~i~F~~v~~~~~~~~~~~~~~~~~~~~~~~~~   72 (169)
T 1rm8_A            1 GQKWQHKHITYSIKNVTP--------KVGDPETRKAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGD   72 (169)
T ss_dssp             CCCCSSSEEEEEECCCCT--------TTCHHHHHHHHHHHHHHHHTTSSCEEEECCTTCCCSSSCCCSEEEEEESSCCSS
T ss_pred             CCCCCCCEEEEEEECCCC--------CCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCEEEECCCCCCCC
T ss_conf             987999868999814799--------999899999999999999863585089944655546664455787425466533


Q ss_pred             -----------EEEEECCCCCCCCCCCCCCCCCCCCC--CCCCCCEEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             -----------35663146775312244335443336--66667346630032346551878888766676666777541
Q gi|254780384|r   87 -----------GYVCTPRYDSRYFMEINFDKADVWRY--GIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY  153 (665)
Q Consensus        87 -----------g~a~~p~~~~~~~~~~~~~~~~~~~~--~~~~g~y~~~t~iHEIGHALGL~Hp~~~~~g~~~~~~~~~~  153 (665)
                                 +.+..|.  ........++....+..  ......+.+.+++|||||||||+||.+.             
T Consensus        73 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~HEiGHaLGL~H~~~~-------------  137 (169)
T 1rm8_A           73 SSPFDGEGGFLAHAYFPG--PGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDP-------------  137 (169)
T ss_dssp             SCCCCSSSSCCEEECCSC--STTTTCEEEETTSCEESSCCSSSSEEHHHHHHHHHHHHHTCCCCSCT-------------
T ss_pred             CCCCCCCCCCCCCCCCCC--CCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC-------------
T ss_conf             455466765101233787--66455356502221233455787621767777777765167889999-------------


Q ss_pred             CCCCCEEEEEEECCCCCCCCCCCCCEECCHHHHHHHHHHHHCCC
Q ss_conf             01420244675235677666655200021122148999986087
Q gi|254780384|r  154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGA  197 (665)
Q Consensus       154 ~~d~~~~TvMSY~~~~~~~~~~~~~~~~tpm~~DI~Alq~lYGa  197 (665)
                            .+||+|.....      .....+||..||+|||+|||+
T Consensus       138 ------~svM~~~~~~~------~~~~~~l~~~Di~~iq~LYGp  169 (169)
T 1rm8_A          138 ------TAIMAPFYQYM------ETDNFKLPNDDLQGIQKIYGP  169 (169)
T ss_dssp             ------TSTTSSSCCCC------CCTTCCCCHHHHHHHHHHHCC
T ss_pred             ------CCCCCCCCCCC------CCCCCCCCHHHHHHHHHHHCC
T ss_conf             ------86254412578------788789899999999986194