HHsearch results for GI: 254780384 and protein with PDBid: 830c_A

>830c_A MMP-13, MMP-13; matrix metalloprotease; HET: RS1; 1.60A {Homo sapiens} SCOP: d.92.1.11 PDB: 456c_A* 1you_A* 1eub_A* 1xuc_A* 1xud_A* 1xur_A* 3elm_A* 3i7g_A* 3i7i_A* 2ow9_A* 2ozr_A* 2d1n_A* 1fls_A* 1fm1_A* 1ztq_A* 2e2d_A 2pjt_A* 1cxv_A*
Probab=99.90  E-value=8.6e-24  Score=159.71  Aligned_cols=126  Identities=24%  Similarity=0.306  Sum_probs=80.3

Q ss_pred             CHHHHHHHHHHHHHHHHHHCCEEEEECCC-CCEEEECCCC------------EEEEECCC-CCCCCCCCCCCCCCCCCCC
Q ss_conf             99999999999998865747568982478-7168961585------------35663146-7753122443354433366
Q gi|254780384|r   48 NPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKFISSNN------------GYVCTPRY-DSRYFMEINFDKADVWRYG  113 (665)
Q Consensus        48 ~~~~~~~~R~Al~~ws~va~ItF~Ev~~~-~d~~f~~~~~------------g~a~~p~~-~~~~~~~~~~~~~~~~~~~  113 (665)
                      ...+++++|.||+.|++|++|+|+||+.. .++.+.....            +....+.. ........+.+....+.. 
T Consensus        28 ~~~~~~~i~~Af~~W~~~~~~~f~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-  106 (168)
T 830c_A           28 HSEVEKAFKKAFKVWSDVTPLNFTRLHDGIADIMISFGIKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWTS-  106 (168)
T ss_dssp             HHHHHHHHHHHHHHHHTTSSCEEEEESSSCCSEEEEEECSSCSSSCCCCSSSSCCEEECCSSSTTTTCEEEETTSCEES-
T ss_pred             HHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCEEECCCCCCCCC-
T ss_conf             8999999999999997236713896257777668887403544455666755310200378886243276245311222-


Q ss_pred             CCCCCEEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCEECCHHHHHHHHHHH
Q ss_conf             66673466300323465518788887666766667775410142024467523567766665520002112214899998
Q gi|254780384|r  114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK  193 (665)
Q Consensus       114 ~~~g~y~~~t~iHEIGHALGL~Hp~~~~~g~~~~~~~~~~~~d~~~~TvMSY~~~~~~~~~~~~~~~~tpm~~DI~Alq~  193 (665)
                      ...+.+.+.+++|||||||||+||.+.                   .+||++....      ......+||..||+|||+
T Consensus       107 ~~~~~~~~~v~~HEiGHaLGL~H~~~~-------------------~svM~p~~~~------~~~~~~~l~~~Di~aiq~  161 (168)
T 830c_A          107 SSKGYNLFLVAAHEFGHSLGLDHSKDP-------------------GALMFPIYTY------TGKSHFMLPDDDVQGIQS  161 (168)
T ss_dssp             SSSSEEHHHHHHHHHHHHTTBCCCSCT-------------------TSTTSSSCCC------C----CCCCHHHHHHHHH
T ss_pred             CCCCCEEEEEEEEECCCCCCCCCCCCC-------------------CCEECCEEEC------CCCCCCCCCHHHHHHHHH
T ss_conf             578855788864311445587888999-------------------8765654224------888778899999999999


Q ss_pred             HCCCCC
Q ss_conf             608766
Q gi|254780384|r  194 IYGAPK  199 (665)
Q Consensus       194 lYGan~  199 (665)
                      |||+|+
T Consensus       162 LYGan~  167 (168)
T 830c_A          162 LYGPGD  167 (168)
T ss_dssp             HHCCCC
T ss_pred             HHCCCC
T ss_conf             719899