PSIBLAST alignment of GI: 254780384 and protein with PDB id: 1kap

gi|1311334|pdb|1KAP|P Chain P, Three-Dimensional Structure Of The Alkaline Protease Of Pseudomonas Aeruginosa: A Two-Domain Protein With A Calcium Binding Parallel Beta Roll Motif Length = 479

 Score =  218 bits (554), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 98/395 (24%), Positives = 159/395 (40%), Gaps = 42/395 (10%)

Query: 3   NIKPVYTTERIADHLLRDQ------------YWSNYFIRYKPDVLTTH-RLSFDITELN- 48
           N  P YT ++ A+ +LR+Q              S  F+    D   T  +   DI  L  
Sbjct: 34  NGHPSYTVDQAAEQILREQASWQKAPGDSVLTLSYSFLTKPNDFFNTPWKYVSDIYSLGK 93

Query: 49  -----PNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSN-------NGYVCTPRYDS 96
                   Q  A+ +L  WS V ++ F +            N         +   P    
Sbjct: 94  FSAFSAQQQAQAKLSLQSWSDVTNIHFVDAGQGDQGDLTFGNFSSSVGGAAFAFLPDVPD 153

Query: 97  RYFMEINF--DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDY 153
               +  +  + +         G        HEIGH LGL HPG YN G       D  Y
Sbjct: 154 ALKGQSWYLINSSYSANVNPANGNYGRQTLTHEIGHTLGLSHPGDYNAGEGDPTYADATY 213

Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQ 212
             D+   SVMSY+  Q++  D    Y + P++ DI A+QK+YGA      G+ +Y     
Sbjct: 214 AEDTRAYSVMSYWEEQNTGQDFKGAYSSAPLLDDIAAIQKLYGANLTTRTGDTVYGFNSN 273

Query: 213 Q---------KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
                       S  + +++D+GG+D LD +     +  I+LN ++ S +GG + N++IA
Sbjct: 274 TERDFYSATSSSSKLVFSVWDAGGNDTLDFSGFSQNQK-INLNEKALSDVGGLKGNVSIA 332

Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
               +E+ +G SG+D++IGN   NV    +GND+  G  G D    +  +        + 
Sbjct: 333 AGVTVENAIGGSGSDLLIGNDVANVLKGGAGNDILYGGLGADQL--WGGAGADTFVYGDI 390

Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
           A     A +  +DF+S  +++  +           
Sbjct: 391 AESSAAAPDTLRDFVSGQDKIDLSGLDAFVNGGLV 425