RPSBLAST alignment of GI: 254780384 and protein with PDBid: 1rm8
>1rm8_A MMP-16, matrix metalloproteinase-16, MT3-MMP; membrane type - matrix metalloproteinase, batimastat, hydroxamate inhibitor, protease, hydrolase; HET: BAT; 1.80A {Homo sapiens} SCOP: d.92.1.11 Length = 169
Score = 49.7 bits (117), Expect = 2e-06
Identities = 36/172 (20%), Positives = 50/172 (29%), Gaps = 48/172 (27%)
Query: 48 NPNAQEVARWALGEWSKVVDLTFEET----------SIHSDIKFISSNNGYVCT------ 91
+P ++ R A W V LTFEE + I F S +G
Sbjct: 22 DPETRKAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGG 81
Query: 92 -------PRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY 144
P + D+ G L A+HE+GHALGL H
Sbjct: 82 FLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPT--- 138
Query: 145 PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYG 196
++M+ F D+ +QKIYG
Sbjct: 139 ----------------AIMAPF------YQYMETDNFKLPNDDLQGIQKIYG 168