RPSBLAST alignment of GI: 254780384 and protein with PDBid: 1slm
>1slm_A Stromelysin-1; hydrolase, metalloprotease, fibroblast, collagen degradation; 1.90A {Homo sapiens} SCOP: a.20.1.2 d.92.1.11 Length = 255
Score = 61.4 bits (148), Expect = 6e-10
Identities = 36/181 (19%), Positives = 54/181 (29%), Gaps = 39/181 (21%)
Query: 35 LTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKFISSNNGYVCTPR 93
LT +++ AL W +V LTF +DI + +
Sbjct: 97 LTYRIVNYTPDLPKDAVDSAVEKALKVWEEVTPLTFSRLYEGEADIMISFAVREHGDFYP 156
Query: 94 YD-------------SRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSY 140
+D + +FD + W GT L A HEIGH+LGL H +
Sbjct: 157 FDGPGNVLAHAYAPGPGINGDAHFDDDEQWTKDT-TGTNLFLVAAHEIGHSLGLFHSANT 215
Query: 141 NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
++M + DI +Q +YG P
Sbjct: 216 E-------------------ALMYPLYH-----SLTDLTRFRLSQDDINGIQSLYGPPPD 251
Query: 201 S 201
S
Sbjct: 252 S 252