HHsearch alignment for GI: 254780386 and conserved domain: COG1566
>COG1566 EmrA Multidrug resistance efflux pump [Defense mechanisms].
Probab=91.98 E-value=0.23 Score=27.48 Aligned_cols=65 Identities=11% Similarity=0.205 Sum_probs=45.0
Q ss_pred EEEECCCCCEEEC-CCEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH-HHHHHHHHH
Q ss_conf 9998578989336-9789999648998889998743433233210012333322211-455542235
Q gi|254780386|r 68 KKFQVENGSQILQ-GTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK-YDVLEKAFE 132 (440)
Q Consensus 68 ~~i~VkeGd~Vkk-Gq~L~~ld~~~~~~~l~~~~~~l~~l~~~l~~~~~~l~~~~~~-~~~~~~~~~ 132 (440)
T Consensus 71 dnq~Vk~Gd~L~~iD~~~y~~al~qAea~la~a~~~~~~~~a~~~~~~A~i~~a~a~~l~~a~~~~~ 137 (352)
T COG1566 71 DNQLVKKGDVLFRIDPRDYRAALEQAEAALAAAEAQLRNLRAQLASAQALIAQAEAQDLDQAQNELE 137 (352)
T ss_pred CCCEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 8988518976899895789999999999999999999989878888888999999899999898889