HHsearch alignment for GI: 254780386 and conserved domain: COG1566

>COG1566 EmrA Multidrug resistance efflux pump [Defense mechanisms].
Probab=91.98  E-value=0.23  Score=27.48  Aligned_cols=65  Identities=11%  Similarity=0.205  Sum_probs=45.0

Q ss_pred             EEEECCCCCEEEC-CCEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH-HHHHHHHHH
Q ss_conf             9998578989336-9789999648998889998743433233210012333322211-455542235
Q gi|254780386|r   68 KKFQVENGSQILQ-GTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK-YDVLEKAFE  132 (440)
Q Consensus        68 ~~i~VkeGd~Vkk-Gq~L~~ld~~~~~~~l~~~~~~l~~l~~~l~~~~~~l~~~~~~-~~~~~~~~~  132 (440)
T Consensus        71 dnq~Vk~Gd~L~~iD~~~y~~al~qAea~la~a~~~~~~~~a~~~~~~A~i~~a~a~~l~~a~~~~~  137 (352)
T COG1566          71 DNQLVKKGDVLFRIDPRDYRAALEQAEAALAAAEAQLRNLRAQLASAQALIAQAEAQDLDQAQNELE  137 (352)
T ss_pred             CCCEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             8988518976899895789999999999999999999989878888888999999899999898889