HHsearch alignment for GI: 254780386 and conserved domain: PRK09578

>PRK09578 periplasmic multidrug efflux lipoprotein precursor; Reviewed.
Probab=99.95  E-value=7.7e-26  Score=190.79  Aligned_cols=239  Identities=14%  Similarity=0.168  Sum_probs=155.8

Q ss_pred             EEEEEEEEEEECCCEEEEECCCCCEEEEEECCCCCEEECCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf             58999799995387389846888689999857898933697899996489988899987434332332100123333222
Q gi|254780386|r   42 ISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN  121 (440)
Q Consensus        42 ~~v~~~G~i~~~~~~~~I~s~~~G~V~~i~VkeGd~VkkGq~L~~ld~~~~~~~l~~~~~~l~~l~~~l~~~~~~l~~~~  121 (440)
T Consensus        50 ~~~~~~G~v~a~~~-v~l~~~v~G~v~~v~v~~Gd~V~kGq~La~lD~~~~~a~~~~a~a~l~~A~a~~~~A~~------  122 (385)
T PRK09578         50 MTVELPGRLDAYRQ-AEVRARVAGIVTARTYEEGQEVKQGAVLFRIDPAPLKAARDAAAGALAKAEAAHLAAAD------  122 (385)
T ss_pred             EEEEEEEEEEEEEE-EEEEEECCEEEEEEEECCCCEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH------
T ss_conf             69999999998799-99996644699999807999873898899985346999999999999999999999999------


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHC
Q ss_conf             11455542235688887765546788654333655420011222112210022321011223222222102333322210
Q gi|254780386|r  122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM  201 (440)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~el~~  201 (440)
T Consensus       123 ----------------------------------------------------------------------------~~~R  126 (385)
T PRK09578        123 ----------------------------------------------------------------------------KRRR  126 (385)
T ss_pred             ----------------------------------------------------------------------------HHHH
T ss_conf             ----------------------------------------------------------------------------9999


Q ss_pred             CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             12222221110000111002466653101223322222222222100012233321123322212222222212223322
Q gi|254780386|r  202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT  281 (440)
Q Consensus       202 ~~~l~~~~~~~~~~l~~~~~~~~~~~~el~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~e~~~~l~e~~~~l~~~~~~l~  281 (440)
T Consensus       127 ~~~L~~~~~is~~~~~~a~~~~~~a-------------------------------------------~a~l~~A~a~l~  163 (385)
T PRK09578        127 YDDLVRDRAVSERDHTEAVADERQA-------------------------------------------KAEVASAKAELA  163 (385)
T ss_pred             HHHHHHCCCCCHHHHHHHHHHHHHH-------------------------------------------HHHHHHHHHHHH
T ss_conf             9998863663267899999999999-------------------------------------------999999999999


Q ss_pred             CCCCCCCCCCCCCCCEEEEECCEEECCCCCCCCCC--CCCCCCCCCCCEEEEEEECHHHHHHCCCC-----------CCE
Q ss_conf             12222212345554116873121201222124445--54210335565047753262231101589-----------831
Q gi|254780386|r  282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ--PLMKIVPHSKLTYIRAKVTPKQIQHVKKG-----------YTA  348 (440)
Q Consensus       282 ~l~~~l~~~~I~AP~~G~V~~l~~~~~G~~v~~G~--~l~~Ivp~~~~l~v~~~v~~~di~~i~~G-----------q~v  348 (440)
T Consensus       164 ~A~~~l~~t~i~AP~~G~V~~~~v-~~G~~v~~~~~~~l~~i~-~~~~~~v~~~~p~~~v~~~~~~~~~g~~~~~~~~~~  241 (385)
T PRK09578        164 RAQLQLDYATVTAPIDGRARRALV-TEGALVGQDQATPLTTVE-QLDPIYVNFSQPAADVEALRRAVKSGRATGIAQQDV  241 (385)
T ss_pred             HHHHHHHCCEECCCCCCEEEEEEC-CCCCEECCCCCCCEEEEE-ECCEEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCE
T ss_conf             888754103523897745888881-788656688873149998-266399999517999999987654143112356753


Q ss_pred             EEEEEECCCCCCCEEEEEEEEEECCCCCCCCCCCCCEEEEEEEEECHHHCCCCCCEECCCCEEEEEEEECEE
Q ss_conf             799981288754439999999713344467776551189999993501125678515237756999992205
Q gi|254780386|r  349 TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT  420 (440)
Q Consensus       349 ~i~~~a~~~~~~~~~~G~V~~Is~~~~~~~~~~~~~~~y~v~i~~~~~~~~~~~~~L~~Gm~~~~~I~~~~~  420 (440)
T Consensus       242 ~v~~~~~~g~~~-~~~g~v~~~~~~vd~~t------rt~~v~~~~~np-----~~~L~pGm~~~v~i~~~~~  301 (385)
T PRK09578        242 AVTLVRADGSEY-PLKGKLLFSDLAVDPST------DTVAMRALFPNP-----ERELLPGAYVRIALDRAVD  301 (385)
T ss_pred             EEEEECCCCCCC-CEEEEEEEEECCCCCCC------CEEEEEEECCCC-----CCCCCCCCEEEEEEECCCC
T ss_conf             799992699723-14689998532314776------529999965787-----5545899689999954766