HHsearch alignment for GI: 254780386 and conserved domain: PRK09859
>PRK09859 multidrug efflux system protein MdtE; Provisional.
Probab=99.95 E-value=3.3e-26 Score=193.27 Aligned_cols=236 Identities=15% Similarity=0.196 Sum_probs=156.1
Q ss_pred EEEEEEEEEECCCEEEEECCCCCEEEEEECCCCCEEECCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 89997999953873898468886899998578989336978999964899888999874343323321001233332221
Q gi|254780386|r 43 SVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122 (440)
Q Consensus 43 ~v~~~G~i~~~~~~~~I~s~~~G~V~~i~VkeGd~VkkGq~L~~ld~~~~~~~l~~~~~~l~~l~~~l~~~~~~l~~~~~ 122 (440)
T Consensus 49 ~~~~~G~v~~~~-~~~l~~~VsG~v~~~~v~~Gd~VkkGq~La~LD~~~~~~~l~~A~A~l~~A~a~~~~A~~------- 120 (385)
T PRK09859 49 LSELPGRTVPYE-VAEIRPQVGGIIIKRNFIEGDKVNQGDSLYQIDPAPLQAELNSAKGSLAKALSTASNARI------- 120 (385)
T ss_pred EEEEEEEEEEEE-EEEEEEECCEEEEEEECCCCCEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH-------
T ss_conf 899879999628-999981456299999838999884898899828479999999999999999999999998-------
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCC
Q ss_conf 14555422356888877655467886543336554200112221122100223210112232222221023333222101
Q gi|254780386|r 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202 (440)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~el~~~ 202 (440)
T Consensus 121 ---------------------------------------------------------------------------~~~R~ 125 (385)
T PRK09859 121 ---------------------------------------------------------------------------TFNRQ 125 (385)
T ss_pred ---------------------------------------------------------------------------HHHHH
T ss_conf ---------------------------------------------------------------------------99999
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 22222211100001110024666531012233222222222221000122333211233222122222222122233221
Q gi|254780386|r 203 KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282 (440)
Q Consensus 203 ~~l~~~~~~~~~~l~~~~~~~~~~~~el~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~e~~~~l~e~~~~l~~~~~~l~~ 282 (440)
T Consensus 126 ~~L~~~~~iS~~~~d~a~~~~~~A~-------------------------------------------A~~~~A~a~l~~ 162 (385)
T PRK09859 126 ASLLKTNYVSRQDYDTARTQLNEAE-------------------------------------------ANVTVAKAAVEQ 162 (385)
T ss_pred HHHHHCCCCCHHHHHHHHHHHHHHH-------------------------------------------HHHHHHHHHHHH
T ss_conf 9887658623547998999999999-------------------------------------------999999999987
Q ss_pred CCCCCCCCCCCCCCEEEEECCEEECCCCCCCCCC--CCCCCCCCCCCEEEEEE------------ECHHHHHHCCCCCCE
Q ss_conf 2222212345554116873121201222124445--54210335565047753------------262231101589831
Q gi|254780386|r 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ--PLMKIVPHSKLTYIRAK------------VTPKQIQHVKKGYTA 348 (440)
Q Consensus 283 l~~~l~~~~I~AP~~G~V~~l~~~~~G~~v~~G~--~l~~Ivp~~~~l~v~~~------------v~~~di~~i~~Gq~v 348 (440)
T Consensus 163 a~~~l~~t~i~APf~GvV~~~~v-~~G~~V~~~~~~~l~~v~-~~~~v~v~~~~~~~~~l~~~~~v~~~~~~~v~~~~~v 240 (385)
T PRK09859 163 ATINLQYANVTSPITGVSGKSSV-TVGALVTANQADSLVTVQ-RLDPIYVDLTQSVQDFLRMKEEVASGQIKQVQGSTPV 240 (385)
T ss_pred HHHHHCCEEEECCCCCCEEEEEC-CCCCEECCCCCCEEEEEE-CCCCCEEEEECCHHHHHHHHHHHHCCHHHHCCCCCEE
T ss_conf 55321226998777870410354-778776478863169997-1676589961378899888877501105531579529
Q ss_pred EEEEEECCCCCCCEEEEEEEEEECCCCCCCCCCCCCEEEEEEEEECHHHCCCCCCEECCCCEEEEEEEECEE
Q ss_conf 799981288754439999999713344467776551189999993501125678515237756999992205
Q gi|254780386|r 349 TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420 (440)
Q Consensus 349 ~i~~~a~~~~~~~~~~G~V~~Is~~~~~~~~~~~~~~~y~v~i~~~~~~~~~~~~~L~~Gm~~~~~I~~~~~ 420 (440)
T Consensus 241 ~~~~~~~~~---~~~~g~v~~~~p~~d~~t~------t~~v~~~~~n-----~~~~l~pGm~~~v~i~~~~~ 298 (385)
T PRK09859 241 QLNLENGKR---YSQTGTLKFSDPTVDETTG------SVTLRAIFPN-----PNGDLLPGMYVTALVDEGSR 298 (385)
T ss_pred EEEECCCCC---EEEEEEEEEECCCCCCCCC------CEEEEEEECC-----CCCCCCCCCEEEEEEECCCC
T ss_conf 999658982---5777889971464336666------4899999248-----76556899679999834765