HHsearch alignment for GI: 254780386 and conserved domain: TIGR02971
>TIGR02971 heterocyst_DevB ABC exporter membrane fusion protein, DevB family; InterPro: IPR014315 Members of this protein are found mostly in the Cyanobacteria, but also in the Planctomycetes. DevB from Anabaena sp. (strain PCC 7120) is partially characterised as a membrane fusion protein of the DevBCA ABC exporter, probably a glycolipid exporter required for heterocyst formation. Most Cyanobacteria have one member only, but Nostoc sp. which has seven members..
Probab=99.95 E-value=4.7e-29 Score=212.22 Aligned_cols=329 Identities=17% Similarity=0.245 Sum_probs=239.2
Q ss_pred EEEEEEEEECCCEEEEECCCC-----CEEEEEE-CCCCCEEECCCEEEEECHHH-HHHHHHHHHHHHHHHHHH-HHCCCC
Q ss_conf 999799995387389846888-----6899998-57898933697899996489-988899987434332332-100123
Q gi|254780386|r 44 VSSSGEILNEDNVVEIKSPFS-----GIIKKFQ-VENGSQILQGTPLLTFEDIE-TTDLIDLKKVSIKNLRCH-IDTEKS 115 (440)
Q Consensus 44 v~~~G~i~~~~~~~~I~s~~~-----G~V~~i~-VkeGd~VkkGq~L~~ld~~~-~~~~l~~~~~~l~~l~~~-l~~~~~ 115 (440)
T Consensus 1 vtALGRLeP~G~v~~v~aP~~Gf~g~~Ri~~LlPV~eGD~V~~Gq~lA~Ld~~~~r~a~l~~A~~qL~~A~~~~~A~~ra 80 (363)
T TIGR02971 1 VTALGRLEPEGEVVAVAAPSSGFAGTDRIKKLLPVAEGDRVKAGQVLAELDSRPERRAELDVARTQLDEAKARILAQVRA 80 (363)
T ss_pred CCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 92344005678668841478888775315550677888701157536764570579999999998999999999999987
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHH
Q ss_conf 33322211455542235688887765546788654333655420011222112210022321011223222222102333
Q gi|254780386|r 116 ALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195 (440)
Q Consensus 116 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~ 195 (440)
T Consensus 81 g~k~~~~a-----------~~~~kq-----ae------------------t~~~~~~~~~~~~aA~~A~l~rl~~e~~~A 126 (363)
T TIGR02971 81 GAKKGEIA-----------AQRAKQ-----AE------------------TVARAAAKLVKDVAAQQATLNRLEAELETA 126 (363)
T ss_pred HCCHHHHH-----------HHHHHH-----HH------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 21634899-----------998776-----63------------------089999888888742014699999999987
Q ss_pred HHHHHCCCCCCCCCC----CCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCC
Q ss_conf 322210122222211----1000011100246665310122332222222222210001223332112332-22122222
Q gi|254780386|r 196 QKDLTMMKNLFEKNA----VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI-SRDLEQNQ 270 (440)
Q Consensus 196 ~~el~~~~~l~~~~~----~~~~~l~~~~~~~~~~~~el~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~e~-~~~l~e~~ 270 (440)
T Consensus 127 ~re~~Ry~~L~~~GARqRLvS~~~lD~~~L~~~~~~~~L~~a~A~~~~~q~TL~~~~~~~~~a~~~~~e~v~~~dv~l~~ 206 (363)
T TIGR02971 127 QRELDRYRSLFRDGARQRLVSASDLDSKKLKLRTAEEELEEAKASLSRTQETLAEQIDEARAALASIAEEVRETDVDLAQ 206 (363)
T ss_pred HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 88999999996488210147600333489999999999999987688778999999998899999999877773199997
Q ss_pred CCCC--CCCCCCCCCCCCCCCCCCCC----CCEEEEECCEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECHHHHHHCC-
Q ss_conf 2221--22233221222221234555----4116873121201222124445542103355650477532622311015-
Q gi|254780386|r 271 RTFA--DEMSKLTILEKTREQKTILS----PIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK- 343 (440)
Q Consensus 271 ~~l~--~~~~~l~~l~~~l~~~~I~A----P~~G~V~~l~~~~~G~~v~~G~~l~~Ivp~~~~l~v~~~v~~~di~~i~- 343 (440)
T Consensus 207 aev~llsa~~~~~~A~~~le~t~~~aRLvaP~~G~vLKi~~-~~Ge~~~-~~Gil~~G-~T~~M~aVAEVYe~Di~Rv~G 283 (363)
T TIGR02971 207 AEVKLLSAAEAVQQAEALLELTYVKARLVAPIDGRVLKIHA-REGEVIG-SEGILELG-DTSQMYAVAEVYETDINRVRG 283 (363)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECC-CCCCCCC-CHHHHEEC-CCCCCEEEEEEEECCHHHCEE
T ss_conf 37899999999999999987676777630789876887557-2276578-30341102-678877999886221000010
Q ss_pred --CCCCEEEEEE--ECCCCCCCEEEEEEE---EEECCCCCC------CCCCCCCEEEEEEEEEC-HHHCCCCCCEECCCC
Q ss_conf --8983179998--128875443999999---971334446------77765511899999935-011256785152377
Q gi|254780386|r 344 --KGYTATVRFP--HYADIREKKFKAIIE---KIDPIISQQ------DNNLQTQEYYEVILKIT-DLAFSDNNIELRNGF 409 (440)
Q Consensus 344 --~Gq~v~i~~~--a~~~~~~~~~~G~V~---~Is~~~~~~------~~~~~~~~~y~v~i~~~-~~~~~~~~~~L~~Gm 409 (440)
T Consensus 284 Wv~GQ~A~i~S~NgAl~----~pL~G~V~sea~vg~~vak~~v~~~dP~aD~DaRVvEVkI~lDnp~~S~--~v~rlt~l 357 (363)
T TIGR02971 284 WVVGQRATITSTNGALS----GPLRGTVRSEARVGSLVAKNDVLSTDPAADVDARVVEVKIRLDNPADSE--RVSRLTNL 357 (363)
T ss_pred EECCCCEEEEECCCCCC----CCCCCCEEECCEEEHHEEHHHCCCCCCCHHHCCEEEEEEEEECCCCCCH--HHHCCCCC
T ss_conf 20375179986288987----2027544220000000110001788871333843899998626853522--44122046
Q ss_pred EEEEEE
Q ss_conf 569999
Q gi|254780386|r 410 PAEVLF 415 (440)
Q Consensus 410 ~~~~~I 415 (440)
T Consensus 358 QV~VaI 363 (363)
T TIGR02971 358 QVDVAI 363 (363)
T ss_pred EEEEEC
T ss_conf 135629