HHsearch alignment for GI: 254780386 and conserved domain: pfam07888
>pfam07888 CALCOCO1 Calcium binding and coiled-coil domain (CALCOCO1) like. Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Probab=90.49 E-value=0.052 Score=31.73 Aligned_cols=15 Identities=7% Similarity=0.018 Sum_probs=10.8
Q ss_pred CCCCCCCCCCCCHHH
Q ss_conf 334576335686168
Q gi|254780386|r 3 HFMWKNLKRNHPASL 17 (440)
Q Consensus 3 ~~~~~~~~~~~p~~~ 17 (440)
T Consensus 25 HYTLt~~i~ph~kDW 39 (546)
T pfam07888 25 HYTIPSGHDWSSRDW 39 (546)
T ss_pred EEECCCCCCCCCCCC
T ss_conf 552588786798761