HHsearch results for GI: 254780386 and protein with PDBid: 2f1m_A
>2f1m_A Acriflavine resistance protein A; helical hairpin, lipoyl domain, beta barrel, transport protein; 2.71A {Escherichia coli}
Probab=99.91 E-value=3e-24 Score=178.74 Aligned_cols=251 Identities=15% Similarity=0.202 Sum_probs=161.8
Q ss_pred EEEEEEEEEEEEEEECCCEEEEECCCCCEEEEEECCCCCEEECCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 67125899979999538738984688868999985789893369789999648998889998743433233210012333
Q gi|254780386|r 38 LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117 (440)
Q Consensus 38 ~~~~~~v~~~G~i~~~~~~~~I~s~~~G~V~~i~VkeGd~VkkGq~L~~ld~~~~~~~l~~~~~~l~~l~~~l~~~~~~l 117 (440)
-|+..++...|+|.|.. ...|.|+++|+|.+++|++||.|++||+|++||+...+..+...+.++...+.++...+.
T Consensus 5 ~~~~~~~~~~G~v~~~~-~v~I~a~v~G~V~~i~v~~G~~VkkG~~L~~ld~~~~~~~l~~~~a~l~~a~~~l~~a~~-- 81 (277)
T 2f1m_A 5 EPLQITTELPGRTSAYR-IAEVRPQVSGIILKRNFKEGSDIEAGVSLYQIDPATYQATYDSAKGDLAKAQAAANIAQL-- 81 (277)
T ss_dssp -----CCEEEEEEECSE-EEEECCSSCEEEEEECSCTTCEECTTSCSEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH--
T ss_pred EEEEEEEEEEEEEEEEE-EEEEEEECCEEEEEEECCCCCEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH--
T ss_conf 46528999889999849-999995457899999879939988999999988589998999999999999865554100--
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHH
Q ss_conf 32221145554223568888776554678865433365542001122211221002232101122322222210233332
Q gi|254780386|r 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197 (440)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~ 197 (440)
T Consensus 82 -------------------------------------------------------------------------------- 81 (277)
T 2f1m_A 82 -------------------------------------------------------------------------------- 81 (277)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
T ss_conf --------------------------------------------------------------------------------
Q ss_pred HHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 22101222222111000011100246665310122332222222222210001223332112332221222222221222
Q gi|254780386|r 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277 (440)
Q Consensus 198 el~~~~~l~~~~~~~~~~l~~~~~~~~~~~~el~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~e~~~~l~e~~~~l~~~~ 277 (440)
++++.+.+...+.....++......+...... +....
T Consensus 82 ~~~r~~~l~~~~~~~~~~~~~a~~~~~~~~~~-------------------------------------------l~~a~ 118 (277)
T 2f1m_A 82 TVNRYQKLLGTQYISKQEYDQALADAQQANAA-------------------------------------------VTAAK 118 (277)
T ss_dssp HHHHHHTTTTSTTCCHHHHHHHHHHHHHHHHH-------------------------------------------HHHHH
T ss_pred HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH-------------------------------------------HHHHH
T ss_conf 46788776443653210157777667765657-------------------------------------------99999
Q ss_pred CCCCCCCCCCCCCCCCCCCEEEEECCEEECCCCCCCCCC--CCCCCCCCCCCEEEEEEECHHHHHHCCCCCC--------
Q ss_conf 332212222212345554116873121201222124445--5421033556504775326223110158983--------
Q gi|254780386|r 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ--PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT-------- 347 (440)
Q Consensus 278 ~~l~~l~~~l~~~~I~AP~~G~V~~l~~~~~G~~v~~G~--~l~~Ivp~~~~l~v~~~v~~~di~~i~~Gq~-------- 347 (440)
.++..++..++++.|+||++|+|...+. ..|+++.+|. +++.+. +...++|++.+++.++..++.|+.
T Consensus 119 a~l~~~~~~l~~~~i~ap~~g~v~~~~~-~~g~~~~~~~~~~l~~i~-~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~ 196 (277)
T 2f1m_A 119 AAVETARINLAYTKVTSPISGRIGKSNV-TEGALVQNGQATALATVQ-QLDPIYVDVTQSSNDMMRLKQELANGTLKQEN 196 (277)
T ss_dssp HHHHHHHHHHHTTEECCSSCEEECCCSS-CBTCEECTTCSSCSEEEE-ECSSEEEEEEEETTTC----------------
T ss_pred HHHHHHHHHHCCEEEECCCCCEEEEEEC-CCCCEECCCCCEEEEEEE-CCCEEEEEEEECHHHHHHHHHHHCCCCCCCCC
T ss_conf 9987776520224997053417988751-469777678860799994-48569999998889999875301122000147
Q ss_pred --EEEEEEECCCCCCCEEEEEEEEEECCCCCCCCCCCCCEEEEEEEEECHHHCCCCCCEECCCCEEEEEEEECEEEHHHH
Q ss_conf --179998128875443999999971334446777655118999999350112567851523775699999220547999
Q gi|254780386|r 348 --ATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQE 425 (440)
Q Consensus 348 --v~i~~~a~~~~~~~~~~G~V~~Is~~~~~~~~~~~~~~~y~v~i~~~~~~~~~~~~~L~~Gm~~~~~I~~~~~~~~~~ 425 (440)
+.+.+.+.+... ..++|+|..|++.....+ ..|.|++.+++ ++..|+|||++++.|.++.++- .
T Consensus 197 ~~~~v~~~~~~~~~-~~~~g~v~~i~~~~~~~t------~~~~v~i~~~~-----~~~~L~~G~~~~v~i~~~~~~~--~ 262 (277)
T 2f1m_A 197 GKAKVSLITSDGIK-FPQDGTLEFSDVTVDQTT------GSITLRAIFPN-----PDHTMMPGMFVRARLEEGLNPN--A 262 (277)
T ss_dssp -CCCEEEECSSSCB-CSSCBEESSSCCEECSSS------CEEEEEEEECC-----TTCCCCSSCEEEEEEC---------
T ss_pred CCCEEEEECCCCCC-EEEEEEEEEEECEECCCC------EEEEEEEEEEC-----CCCCCCCCCEEEEEEEECCCCC--E
T ss_conf 86169999468772-025799999705083684------69999999839-----9885689999999999678499--4
Q ss_pred HHHHH
Q ss_conf 99999
Q gi|254780386|r 426 IIHPI 430 (440)
Q Consensus 426 ~~~p~ 430 (440)
|+-|.
T Consensus 263 l~VP~ 267 (277)
T 2f1m_A 263 ILVPQ 267 (277)
T ss_dssp -----
T ss_pred EEECH
T ss_conf 99897