HHsearch results for GI: 254780386 and protein with PDBid: 3lnn_A
>3lnn_A Membrane fusion protein (MFP-RND) heavy metal CAT tricomponent efflux HMXB (CZCB-LIKE)...; structural genomics, PSI-2; 2.80A {Cupriavidus metallidurans}
Probab=99.92 E-value=5.5e-24 Score=176.95 Aligned_cols=117 Identities=22% Similarity=0.359 Sum_probs=93.5
Q ss_pred CCCCCCCCCEEEEECCEEECCCCCCCCCCC-CCCCCCCCCCEEEEEEECHHHHHHCCCCCCEEEEEEECCCCCCCEEEEE
Q ss_conf 123455541168731212012221244455-4210335565047753262231101589831799981288754439999
Q gi|254780386|r 288 EQKTILSPIAGTIVYNQSFSSSNYAQQSQP-LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366 (440)
Q Consensus 288 ~~~~I~AP~~G~V~~l~~~~~G~~v~~G~~-l~~Ivp~~~~l~v~~~v~~~di~~i~~Gq~v~i~~~a~~~~~~~~~~G~ 366 (440)
..+.|+||++|+|...+. ..|+.+.+|.+ |+.+. +.+.+++.+.|++.++.++++|+++.+++++++. ...|+
T Consensus 169 ~~~~i~AP~~G~V~~~~~-~~g~~v~~~~~~l~~i~-d~~~~~~~~~v~~~~~~~i~~G~~v~i~~~~~~~----~~~~~ 242 (359)
T 3lnn_A 169 HILAVRSPINGRVVDLNA-ATGAYWNDTTASLMTVA-DLSHVFVTANAQEKDLGHVYVGQSATVKFDAYDD----PQPGK 242 (359)
T ss_dssp SEEEEECSSCEEEEECCC-CBTCEECCSSCCSEEEE-CCSEEEEEEEECGGGSTTCCTTCEEEEBCSSCSS----CEEEE
T ss_pred CEEEEECCCCCCCEEEEC-CCCCEEEECCCEEEEEE-CCCCCCEEEECCHHHHHHHCCCCEEEEEEECCCC----CCEEE
T ss_conf 349998565775214200-13835763142036874-1555312450579998751069848999956798----51359
Q ss_pred EEEEECCCCCCCCCCCCCEEEEEEEEECHHHCCCCCCEECCCCEEEEEEEECEEE
Q ss_conf 9997133444677765511899999935011256785152377569999922054
Q gi|254780386|r 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421 (440)
Q Consensus 367 V~~Is~~~~~~~~~~~~~~~y~v~i~~~~~~~~~~~~~L~~Gm~~~~~I~~~~~~ 421 (440)
+..|+|.....+ ..|.|++.++. ++..|+|||++++.|..+.+.
T Consensus 243 ~~~i~~~~~~~t------~~~~v~~~~~~-----~~~~l~~G~~v~v~i~~~~~~ 286 (359)
T 3lnn_A 243 VRYVGQILDADT------RTTKVRMVFDN-----PDGRLRPGMFAQATFLSQPHE 286 (359)
T ss_dssp EEECCCCCCTTS------CCEEEEEEEEC-----SSCCCCTTCEEEEEEECCCEE
T ss_pred EEEEEEEEECCC------CEEEEEEEECC-----CCCCCCCCCEEEEEEECCCCC
T ss_conf 999911660565------14899996018-----732114697899998506656