HHSEARCH alignment of GI: 254780386 and SCOP domain: d1vf7a_

Alignment

Probab=93.38  E-value=0.0098  Score=33.53  Aligned_cols=30  Identities=13%  Similarity=0.133  Sum_probs=23.9

Q ss_pred             CCCCEEEEEEECHHHHHHCCCCCCEEEEEEE
Q ss_conf             5565047753262231101589831799981
Q gi|254780386|r  324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPH  354 (440)
Q Consensus       324 ~~~~l~v~~~v~~~di~~i~~Gq~v~i~~~a  354 (440)
                      ....+.|.+.||..| +.+++||.|+++++.
T Consensus       207 ~t~t~~v~~~i~n~~-~~L~pGm~v~v~i~~  236 (237)
T d1vf7a_         207 GTGSVTIRAVFPNPN-NELLPGMFVHAQLQE  236 (237)
T ss_dssp             SSSEEEECBEEECSS-SCCCTTCEEEEEEEC
T ss_pred             CCCEEEEEEEEECCC-CCCCCCCEEEEEEEC
T ss_conf             884899999998999-968899989999945

SCOP domain information

class: Membrane and cell surface proteins and peptides
fold: HlyD-like secretion proteins
superfamily: HlyD-like secretion proteins
family: HlyD-like secretion proteins
domain: Multidrug resistance protein MexA domain
species: Pseudomonas aeruginosa [TaxId: 287]