BLAST/PSIBLAST alignment of GI: 254780386 and GI: 87198270 at iteration 1
>gi|87198270|ref|YP_495527.1| Type I secretion membrane fusion protein, HlyD [Novosphingobium aromaticivorans DSM 12444] Length = 446
>gi|87133951|gb|ABD24693.1| Type I secretion membrane fusion protein, HlyD [Novosphingobium aromaticivorans DSM 12444] Length = 446
 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 99/457 (21%), Positives = 194/457 (42%), Gaps = 62/457 (13%)

Query: 12  NHPASLKRMTLLSIIGIIG-----LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           + PA      L  +  I+G     L   ++++PI  +V  +G++  +  V  I  P  G+
Sbjct: 19  DAPAPESATNLRRLAAIVGGLFVVLFAMALVVPIGGAVIGNGQVGVQSRVKRIAHPTGGV 78

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLNNK 123
           I +  V NG  + QG  L+  +D  T        ++++ L   R  ++ E+  L  +   
Sbjct: 79  IAEIAVTNGEHVKQGQLLMRLDDRVTGADATYSSLTVEQLLAQRARLEAERLGLGSVTFP 138

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD-LE 182
            ++L     S  + + D   + H             ++R   ++  ++R+    R++  +
Sbjct: 139 PELLNAGTPSAAKAMAD---EAH-------------LFRMRSVETAQVRAQLGARVNQYQ 182

Query: 183 NKSSLLRALLSSHQKDLTMM-------KNLFEKNAVSQNDLNQQERIVYKSTLELRENIH 235
            +   + A ++S +K  T++       K+L++K  V+ N LNQ ER    S ++L  ++ 
Sbjct: 183 QEIRGIEAQIASLRKQRTLIEPERQSVKDLWDKQLVTINRLNQLER----SAVDLDGSVG 238

Query: 236 EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD-EMSKL-TILEKTR------ 287
                +        EA        +E S  + Q +R  A  E++++ T L + R      
Sbjct: 239 ALNAQIAQARARITEA--------QEQSIQVSQQRRVDAGVELAQVNTALNQQRLRSVAA 290

Query: 288 ----EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
               ++  I +P +GT+      +  +  + ++P+M+IVP   +  + A + P  I  V 
Sbjct: 291 NDQQDRSEIRAPYSGTVEKIAFAAIGDVVRPAEPIMEIVPDRDVMVVEAAIGPADIDQVA 350

Query: 344 KGYTATVRFPHY--ADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN 401
           KG  A VRF  +  A   E   K +    D    + +N      +Y V + +   A +  
Sbjct: 351 KGQVARVRFSAFNRAATPEIAGKVLYVATD----RTENPESRASFYMVRIAVDQAAIARE 406

Query: 402 NIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
            ++LR+G PAEV     + +L      P+ D + + F
Sbjct: 407 KLDLRSGMPAEVYIETGSRSLLSYFTKPLRDQFSRAF 443