BLAST/PSIBLAST alignment of GI: 254780386 and GI: 87198270 at iteration 1
>gi|87198270|ref|YP_495527.1| Type I secretion membrane fusion protein, HlyD [Novosphingobium aromaticivorans DSM 12444] Length = 446
>gi|87133951|gb|ABD24693.1| Type I secretion membrane fusion protein, HlyD [Novosphingobium aromaticivorans DSM 12444] Length = 446
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 99/457 (21%), Positives = 194/457 (42%), Gaps = 62/457 (13%)
Query: 12 NHPASLKRMTLLSIIGIIG-----LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
+ PA L + I+G L ++++PI +V +G++ + V I P G+
Sbjct: 19 DAPAPESATNLRRLAAIVGGLFVVLFAMALVVPIGGAVIGNGQVGVQSRVKRIAHPTGGV 78
Query: 67 IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLNNK 123
I + V NG + QG L+ +D T ++++ L R ++ E+ L +
Sbjct: 79 IAEIAVTNGEHVKQGQLLMRLDDRVTGADATYSSLTVEQLLAQRARLEAERLGLGSVTFP 138
Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD-LE 182
++L S + + D + H ++R ++ ++R+ R++ +
Sbjct: 139 PELLNAGTPSAAKAMAD---EAH-------------LFRMRSVETAQVRAQLGARVNQYQ 182
Query: 183 NKSSLLRALLSSHQKDLTMM-------KNLFEKNAVSQNDLNQQERIVYKSTLELRENIH 235
+ + A ++S +K T++ K+L++K V+ N LNQ ER S ++L ++
Sbjct: 183 QEIRGIEAQIASLRKQRTLIEPERQSVKDLWDKQLVTINRLNQLER----SAVDLDGSVG 238
Query: 236 EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD-EMSKL-TILEKTR------ 287
+ EA +E S + Q +R A E++++ T L + R
Sbjct: 239 ALNAQIAQARARITEA--------QEQSIQVSQQRRVDAGVELAQVNTALNQQRLRSVAA 290
Query: 288 ----EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
++ I +P +GT+ + + + ++P+M+IVP + + A + P I V
Sbjct: 291 NDQQDRSEIRAPYSGTVEKIAFAAIGDVVRPAEPIMEIVPDRDVMVVEAAIGPADIDQVA 350
Query: 344 KGYTATVRFPHY--ADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN 401
KG A VRF + A E K + D + +N +Y V + + A +
Sbjct: 351 KGQVARVRFSAFNRAATPEIAGKVLYVATD----RTENPESRASFYMVRIAVDQAAIARE 406
Query: 402 NIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
++LR+G PAEV + +L P+ D + + F
Sbjct: 407 KLDLRSGMPAEVYIETGSRSLLSYFTKPLRDQFSRAF 443