HHsearch alignment for GI: 254780387 and conserved domain: COG1301
>COG1301 GltP Na+/H+-dicarboxylate symporters [Energy production and conversion].
Probab=100.00 E-value=0 Score=702.36 Aligned_cols=402 Identities=45% Similarity=0.797 Sum_probs=381.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
Q ss_conf 5899999999999999999999957789--99876669999999999999999999999613430246777999999999
Q gi|254780387|r 14 PLYKILYIQVLVAIFSGMALGHFVPQIG--VQMQPLGDIFVKTTKMLITPVIFLTVSTGIARMKDMKVIGQIFWKAMFLF 91 (426)
Q Consensus 14 ~~~~~L~~~ilig~v~Gi~~G~~~~~~~--~~l~~~G~lfi~lLkm~viPLVf~sIi~gIa~l~~~~~~gki~~kti~~~ 91 (426)
T Consensus 3 ~~~~~l~~qv~iglilGi~~Gl~~~~~~~~~~l~plg~~Fi~Likmii~PlVf~tlv~gIa~~~~~k~~gr~g~ktl~yf 82 (415)
T COG1301 3 SKKLSLYLQVLIGLILGILVGLFLPELGAAIYLKPLGDIFIKLIKMIIIPLVFFTLVLGIASLGDLKKLGRLGGKTLIYF 82 (415)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_conf 30224999999999999999853565331256503889999999999999999999999974103277799999999999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHH
Q ss_conf 99999999999999877302468785434421111100133344308999998852054786321570579999999999
Q gi|254780387|r 92 FVFSMFALVIGLIVGNIAKPGIGMNVDLKSLNTESIAHIKSSHAKSFIGFMQDMIPDTALSALTSGNILQTLIVALLFGI 171 (426)
Q Consensus 92 l~tt~iA~~igl~~~~~~~PG~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~liP~Nif~a~a~gniL~iivfai~~Gi 171 (426)
T Consensus 83 ~~tt~~A~~iGl~~~~~~~Pg~g~~~~~~~~~~~~~~------~~~~~~~l~~iiP~ni~~a~a~g~vLqil~fail~G~ 156 (415)
T COG1301 83 LVTTTLAIAIGLVVANVLQPGAGINIDPATLDTGAES------EVSILDFLLDIIPTNIFGALAEGNVLQILFFAILFGL 156 (415)
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC------CCHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHH
T ss_conf 9999999999999999808887777771015764212------1039999886168974777257981999999999999
Q ss_pred HHHCCCCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 95215643024-89899999999999999865453337889999998510740024689999999999988779999999
Q gi|254780387|r 172 SLSLVGEKSDT-IRKCLEEINFPVFRMVSIVMRIAPLGAFGAMSFTIGKYGLSSISNLIFLVFCLYATSAFFILGVLGIL 250 (426)
Q Consensus 172 A~~~~~~k~~~-l~~~~~~~~~v~~kii~~vi~laPigvf~lia~~~a~~g~~~l~~l~~~v~~~~~~~~~~~~~~~~l~ 250 (426)
T Consensus 157 al~~~~~~~~~~v~~~~~~~~~~m~~v~~~vm~laPigvf~~~a~~v~~~G~~~L~~l~~~v~~~~~~~~l~~~vvl~~~ 236 (415)
T COG1301 157 ALAALGEKGKPPVENLFESLSEAMFKVTNFVMRLAPIGVFGLMAFTVAKYGFGSLLSLGKLVLAVYLGLLLFVFVVLGLL 236 (415)
T ss_pred HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99875422423799999999999999999999971499999999999984776799999999999999999999999999
Q ss_pred HH-HCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH-CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
Q ss_conf 96-328660344320001467776421431007999999984-4899758446767777533752158999999999985
Q gi|254780387|r 251 AR-FCRFSIIKLIIFLKEEVLLVLSTSSSESALPGLMKKMEE-AGCHRSIVSMVVPTGYSFNLDGSNIYITLATLFISQA 328 (426)
Q Consensus 251 ~~-~~~~~p~~~~~~~~~~~~~Af~T~SS~AtlP~~l~~~e~-~gv~~~i~~fviPlG~tinm~G~a~~~~~~~iFia~~ 328 (426)
T Consensus 237 ~~~~~g~s~~~~~r~~~~~~~~Af~T~SS~atLPv~m~~~e~~~Gv~~~i~~fvvPlG~t~nldGtaiy~~~a~~FIAq~ 316 (415)
T COG1301 237 LKLLSGFSPFKFLRYISEALLLAFSTSSSEATLPVTMEKAEKSLGVPKSIVSFVVPLGYTFNLDGTAIYQTLAALFIAQA 316 (415)
T ss_pred HHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCEECCCCHHHHHHHHHHHHHHH
T ss_conf 99954888899999988999999853204356689999999856998434679953574258861199999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 09879989999999999999621368432589999999986159989999999977776435678998767799999999
Q gi|254780387|r 329 TNVPLSLTDQLSLLLIAMVSSKGAAGVTGSAFITLAATITLVPSLPIAGMTLILGVDRFMSECRSVTNFIGNAVMTVVVS 408 (426)
Q Consensus 329 ~gi~l~~~~~~~~~~~~~i~s~g~agvPg~~~v~~~~~~~~~~glP~~~i~ll~~id~~~D~~rT~~NV~gd~~~a~iv~ 408 (426)
T Consensus 317 ~g~~Ls~~~~l~~~~~~~l~S~G~AGVpg~~~v~l~~~L~~v-glp~~g~aLi~gid~~ld~~rT~~Nv~Gd~~~~~iva 395 (415)
T COG1301 317 YGIPLSLGQQLTLLLVAMLASKGAAGVPGGGLVVLAATLSSV-GLPLEGLALILGIDRFLDMARTATNVTGDAVATVVVA 395 (415)
T ss_pred HCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 489988999999999999995035899842999999999982-7808789999999999988899999875578988753
Q ss_pred HHHCC-CCHHHHHHH
Q ss_conf 88251-048988876
Q gi|254780387|r 409 RWEKK-LDPKLFNKY 422 (426)
Q Consensus 409 ~~~~~-~d~~~~~~~ 422 (426)
T Consensus 396 ~~e~~~~~~~v~~~~ 410 (415)
T COG1301 396 KWEGEEKADAVLSEE 410 (415)
T ss_pred HHCCCCCHHHHHHCC
T ss_conf 130543177887244