HHsearch alignment for GI: 254780387 and conserved domain: COG3633
>COG3633 SstT Na+/serine symporter [Amino acid transport and metabolism].
Probab=100.00 E-value=0 Score=366.57 Aligned_cols=389 Identities=22% Similarity=0.318 Sum_probs=323.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 58999999999999999999999577899987666999999999999999999999961343024677799999999999
Q gi|254780387|r 14 PLYKILYIQVLVAIFSGMALGHFVPQIGVQMQPLGDIFVKTTKMLITPVIFLTVSTGIARMKDMKVIGQIFWKAMFLFFV 93 (426)
Q Consensus 14 ~~~~~L~~~ilig~v~Gi~~G~~~~~~~~~l~~~G~lfi~lLkm~viPLVf~sIi~gIa~l~~~~~~gki~~kti~~~l~ 93 (426)
T Consensus 11 ~~~gsLv~qI~iGl~lGi~~a~~s~~~a~~vgllG~lFv~aLkAvAPvLVf~LV~asIan~k~gq~t-~-ir~IivLYl~ 88 (407)
T COG3633 11 LARGSLVKQILIGLVLGILLAIISPPAAEAVGLLGTLFVGALKAVAPVLVFILVMASIANHKKGQKT-N-IRPIIVLYLL 88 (407)
T ss_pred HHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-C-CCEEEHHHHH
T ss_conf 9810079999999999999996386578786278999999998888899999999998613314524-6-5333358988
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHH
Q ss_conf 99999999999987730246878543442111110013334430899999885205478632157057999999999995
Q gi|254780387|r 94 FSMFALVIGLIVGNIAKPGIGMNVDLKSLNTESIAHIKSSHAKSFIGFMQDMIPDTALSALTSGNILQTLIVALLFGISL 173 (426)
Q Consensus 94 tt~iA~~igl~~~~~~~PG~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~liP~Nif~a~a~gniL~iivfai~~GiA~ 173 (426)
T Consensus 89 GTF~Aal~AVia~f~F-P~~-lvL~--~~--~~~~spP~gi~eVl~~Ll~~~-VdNPinAl~~aNyiGiLaWaiglG~Al 161 (407)
T COG3633 89 GTFSAALVAVIASFAF-PST-LVLA--SS--AGDISPPSGIVEVLKSLLMSL-VDNPINALLNANYIGILAWAIGLGLAL 161 (407)
T ss_pred HHHHHHHHHHHHHHCC-CEE-EEEE--CC--CCCCCCCCCHHHHHHHHHHHH-HCCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_conf 8889999999986017-616-9983--46--777799732999999999998-537788986177022569998776998
Q ss_pred HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Q ss_conf 2156430248989999999999999986545333788999999851074002468999999999998877999999996-
Q gi|254780387|r 174 SLVGEKSDTIRKCLEEINFPVFRMVSIVMRIAPLGAFGAMSFTIGKYGLSSISNLIFLVFCLYATSAFFILGVLGILAR- 252 (426)
Q Consensus 174 ~~~~~k~~~l~~~~~~~~~v~~kii~~vi~laPigvf~lia~~~a~~g~~~l~~l~~~v~~~~~~~~~~~~~~~~l~~~- 252 (426)
T Consensus 162 rh~---s~~tk~~~~d~~e~vs~iV~~iI~fAP~GIfgLVasT~a~tG~~aL~gYa~LL~vLvg~Mlfva~VVNpliv~~ 238 (407)
T COG3633 162 RHA---SDTTKNLVNDLSEAVSKIVKVVIRFAPIGIFGLVASTLAETGFGALWGYAQLLAVLVGCMLFVALVVNPLIVYW 238 (407)
T ss_pred HHC---CHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
T ss_conf 850---17689999999988887773025436740667878888860178999899999999999999999853224788
Q ss_pred HCCCCHHHH-HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC
Q ss_conf 328660344-3200014677764214310079999999844899758446767777533752158999999999985098
Q gi|254780387|r 253 FCRFSIIKL-IIFLKEEVLLVLSTSSSESALPGLMKKMEEAGCHRSIVSMVVPTGYSFNLDGSNIYITLATLFISQATNV 331 (426)
Q Consensus 253 ~~~~~p~~~-~~~~~~~~~~Af~T~SS~AtlP~~l~~~e~~gv~~~i~~fviPlG~tinm~G~a~~~~~~~iFia~~~gi 331 (426)
T Consensus 239 kiRrNPyPLV~~ClReSg~tAFFTRSSAANIPVNm~Lc~kl~ldedtYsvSIPLGAtINMaGAAITItvLtLaAvhT~gi 318 (407)
T COG3633 239 KIRRNPYPLVLTCLRESGVTAFFTRSSAANIPVNMALCKKLGLDEDTYSVSIPLGATINMAGAAITITVLTLAAVHTLGI 318 (407)
T ss_pred EECCCCCCHHHHHHHHCCEEEEEECCCCCCCCCCHHHHHHCCCCCCCEEEEEECCCEEECCCHHHHHHHHHHHHHHHCCC
T ss_conf 75278866268876521707998524345786009999872998542157600576110454125679999988886286
Q ss_pred CCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 79989999999999999621368432589999999986159989999999977----77643567899876779999999
Q gi|254780387|r 332 PLSLTDQLSLLLIAMVSSKGAAGVTGSAFITLAATITLVPSLPIAGMTLILGV----DRFMSECRSVTNFIGNAVMTVVV 407 (426)
Q Consensus 332 ~l~~~~~~~~~~~~~i~s~g~agvPg~~~v~~~~~~~~~~glP~~~i~ll~~i----d~~~D~~rT~~NV~gd~~~a~iv 407 (426)
T Consensus 319 ~vd~~tAlLLSvVA~~~ACGASGVAGGSLLLIPlACslF-gI~~DvAmqvV~VGFIIgvlQDS~ETALNSSTDVLFTAa~ 397 (407)
T COG3633 319 PVDLPTALLLSVVASVCACGASGVAGGSLLLIPLACSLF-GISNDVAMQVVAVGFIIGVLQDSAETALNSSTDVLFTAAA 397 (407)
T ss_pred CCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHC-CCCHHHHHHHHEEEEEEEEEHHHHHHHHCCCCHHHHHHHH
T ss_conf 015889999999999983355666686156446566663-9966888876401068888633577765566127999987
Q ss_pred HHHHCCCC
Q ss_conf 98825104
Q gi|254780387|r 408 SRWEKKLD 415 (426)
Q Consensus 408 ~~~~~~~d 415 (426)
T Consensus 398 c~ae~~k~ 405 (407)
T COG3633 398 CQAEDRKL 405 (407)
T ss_pred HHHHHHHH
T ss_conf 46677632