HHsearch alignment of GI: 254780387 and MMDB domain: 2nwl_A_
>2nwl_A (A:) GLTPH, glutamate symport protein; alpha helical, membrane protein, helical hairpin, unwound region, transport protein; HET: PLM; 2.96A {Pyrococcus horikoshii} PDB: 2nww_A* 1xfh_A* 2nwx_A*
Probab=98.03 E-value=0.00068 Score=40.17 Aligned_cols=229 Identities=12% Similarity=0.066 Sum_probs=144.7
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
Q ss_conf 00026358999999999999999999999-----5778999876669999999999999999999999613430246777
Q gi|254780387|r 8 HGDIRPPLYKILYIQVLVAIFSGMALGHF-----VPQIGVQMQPLGDIFVKTTKMLITPVIFLTVSTGIARMKDMKVIGQ 82 (426)
Q Consensus 8 ~~~~~~~~~~~L~~~ilig~v~Gi~~G~~-----~~~~~~~l~~~G~lfi~lLkm~viPLVf~sIi~gIa~l~~~~~~gk 82 (426)
+-++|+++++++...+++|+++|+.++.. .-++....+-+=--.++++=...+=.-..+-+....+-+..+-.+|
T Consensus 5 ~~~~k~sl~~~ilialilGi~lG~~~~~~~~~~~~~~~l~~~G~lfi~lLkm~V~PlVf~sii~~I~~L~~~~~g~l~~~ 84 (422)
T 2nwl_A 5 RKYIEYPVLIKILIGLILGAIVGLILGHYGYAHAVHTYVKPFGDLFVRLLKMLVMPIVFASLVVGAASISPARLGRVGVK 84 (422)
T ss_dssp -----CCCTTHHHHHHHHHHHHHHHHHHTTTHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTTHHHHHHH
T ss_pred HHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
T ss_conf 88622669999999999999999995432202789999999999999999999999999999999974551101227999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH-HHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHCCCHH
Q ss_conf 99999999999999999999999877302468785434-42111110013334430899999885205478632157057
Q gi|254780387|r 83 IFWKAMFLFFVFSMFALVIGLIVGNIAKPGIGMNVDLK-SLNTESIAHIKSSHAKSFIGFMQDMIPDTALSALTSGNILQ 161 (426)
Q Consensus 83 i~~kti~~~l~tt~iA~~igl~~~~~~~PG~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~liP~Nif~a~a~gniL~ 161 (426)
.....+........++...+......-........... .....+..+. ....+.+.+.+.+|+|.+.+...+++++
T Consensus 85 ~~~~f~~~t~~A~~ig~~~~~~~~pg~~~~~~~~~~~~~~~~~~~~~~~---~~~~ip~ni~~~~~~~~~~~~~~~ail~ 161 (422)
T 2nwl_A 85 IVVYYLLTSAFAVTLGIIMARLFNPGAGIHLAVGGQQFQPHQAPPLVHI---LLDIVPTNPFGALANGQVLPTIFFAIIL 161 (422)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCCCCSCCCCCCCCCC-----CCTHHH---HGGGSCSCHHHHHHTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCHHHHHH---HHHHCCCCHHHHHHCCCCCCHHHHHHHH
T ss_conf 9999999999999999999987601333220010332043210269999---9982552179887457743036788888
Q ss_pred HHHHHHHHHH---HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
Q ss_conf 9999999999---9521564302489899999999999999865453337889999998510740024689999999999
Q gi|254780387|r 162 TLIVALLFGI---SLSLVGEKSDTIRKCLEEINFPVFRMVSIVMRIAPLGAFGAMSFTIGKYGLSSISNLIFLVFCLYAT 238 (426)
Q Consensus 162 iivfai~~Gi---A~~~~~~k~~~l~~~~~~~~~v~~kii~~vi~laPigvf~lia~~~a~~g~~~l~~l~~~v~~~~~~ 238 (426)
.++++.++|. ....-++.-..+.+-+++.-.-+.+.+-+...+.=++..+-.....+...+..+..+...+......
T Consensus 162 gi~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~ii~l~P~gvf~lia~~~~~~g~~~l~~l~~~~~~~~~~~~i 241 (422)
T 2nwl_A 162 GIAITYLMNSENEKVRKSAETLLDAINGLAEAMYKIVNGVMQYAPIGVFALIAYVMAEQGVHVVGELAKVTAAVYVGLTL 241 (422)
T ss_dssp HHHHHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSHHHHHHHHHHHHHTTTGGGCCTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999840221034566788999999999999975688777678999999999987413557788889999999999999
Q ss_pred H
Q ss_conf 9
Q gi|254780387|r 239 S 239 (426)
Q Consensus 239 ~ 239 (426)
.
T Consensus 242 ~ 242 (422)
T 2nwl_A 242 Q 242 (422)
T ss_dssp H
T ss_pred H
T ss_conf 9