HHsearch results for GI: 254780387 and protein with PDBid: 2nwl_A

>2nwl_A GLTPH, glutamate symport protein; alpha helical, membrane protein, helical hairpin, unwound region, transport protein; HET: PLM; 2.96A {Pyrococcus horikoshii} PDB: 2nww_A* 1xfh_A* 2nwx_A* 3kbc_A
Probab=100.00  E-value=0  Score=665.51  Aligned_cols=400  Identities=27%  Similarity=0.525  Sum_probs=371.4

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
Q ss_conf             026358999999999999999999999577------89998766699999999999999999999996134302467779
Q gi|254780387|r   10 DIRPPLYKILYIQVLVAIFSGMALGHFVPQ------IGVQMQPLGDIFVKTTKMLITPVIFLTVSTGIARMKDMKVIGQI   83 (426)
Q Consensus        10 ~~~~~~~~~L~~~ilig~v~Gi~~G~~~~~------~~~~l~~~G~lfi~lLkm~viPLVf~sIi~gIa~l~~~~~~gki   83 (426)
                      +.||....++..|+++|+++|+++|.++++      ...|++++||+|+|++||+++|+||+|++.|++++++ ++.||+
T Consensus         3 ~~~k~~~~~l~~~ilia~v~Gi~~G~~~~~~~~~~~~~~~l~~~G~lFi~lLkm~vvPlI~~sii~~i~~l~~-~~~gri   81 (422)
T 2nwl_A            3 LYRKYIEYPVLIKILIGLILGAIVGLILGHYGYAHAVHTYVKPFGDLFVRLLKMLVMPIVFASLVVGAASISP-ARLGRV   81 (422)
T ss_dssp             -------CCCTTHHHHHHHHHHHHHHHHHHTTTHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTT-TTHHHH
T ss_pred             HHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-HHCCCH
T ss_conf             8887522779999999999999999996542212789999999999999999999999999999999975340-100107


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHCCCHHHH
Q ss_conf             99999999999999999999998773024687854344211111001333443089999988520547863215705799
Q gi|254780387|r   84 FWKAMFLFFVFSMFALVIGLIVGNIAKPGIGMNVDLKSLNTESIAHIKSSHAKSFIGFMQDMIPDTALSALTSGNILQTL  163 (426)
Q Consensus        84 ~~kti~~~l~tt~iA~~igl~~~~~~~PG~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~liP~Nif~a~a~gniL~ii  163 (426)
                      +.|++.||+.++.+|+.+|+.++++++||.+.+.+...      +..+..+.+++.|++.+++|+|+|+++++||++|++
T Consensus        82 ~~k~i~~~~~tt~~a~~lgl~~~~~~~pg~~~~~~~~~------~~~~~~~~~~~~~~~~~~ip~Ni~~a~~~~~~l~vi  155 (422)
T 2nwl_A           82 GVKIVVYYLLTSAFAVTLGIIMARLFNPGAGIHLAVGG------QQFQPHQAPPLVHILLDIVPTNPFGALANGQVLPTI  155 (422)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHSCCCCSCCCCCCC------CCC-----CCTHHHHGGGSCSCHHHHHHTCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH------HHCCCCCCCCHHHHHHHHCCCCHHHHHHCCCCCHHH
T ss_conf             99999999999999999999999843877540012104------430553477499999983889779996458863036


Q ss_pred             HHHHHHHHHHHCCC--------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
Q ss_conf             99999999952156--------4302489899999999999999865453337889999998510740024689999999
Q gi|254780387|r  164 IVALLFGISLSLVG--------EKSDTIRKCLEEINFPVFRMVSIVMRIAPLGAFGAMSFTIGKYGLSSISNLIFLVFCL  235 (426)
Q Consensus       164 vfai~~GiA~~~~~--------~k~~~l~~~~~~~~~v~~kii~~vi~laPigvf~lia~~~a~~g~~~l~~l~~~v~~~  235 (426)
                      +||+++|+|+.+.+        |+.+++.+++++++++++|+++|+|+++|+|+|+++|++.+++|.+.+.++++++.++
T Consensus       156 ~fai~~Gia~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~iv~~i~~l~Pigvf~l~a~~~~~~g~~~l~~l~~~~~~~  235 (422)
T 2nwl_A          156 FFAIILGIAITYLMNSENEKVRKSAETLLDAINGLAEAMYKIVNGVMQYAPIGVFALIAYVMAEQGVHVVGELAKVTAAV  235 (422)
T ss_dssp             HHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSHHHHHHHHHHHHHTTTGGGCCTHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_conf             89888899999840100366678889999999999999999999999886999999999987302346788899999999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHH
Q ss_conf             99998877999999996328660344320001467776421431007999999984489975844676777753375215
Q gi|254780387|r  236 YATSAFFILGVLGILARFCRFSIIKLIIFLKEEVLLVLSTSSSESALPGLMKKMEEAGCHRSIVSMVVPTGYSFNLDGSN  315 (426)
Q Consensus       236 ~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~Af~T~SS~AtlP~~l~~~e~~gv~~~i~~fviPlG~tinm~G~a  315 (426)
                      ++++.++.++.++++.+++|+||++++|+++|++++||+|+||+||+|+++||+||+|+||++++|++|+|+|+||||+|
T Consensus       236 ~~~~~l~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~Af~T~SS~atlP~~l~~~~~~gv~~~i~~fvlPlg~t~n~~G~a  315 (422)
T 2nwl_A          236 YVGLTLQILLVYFVLLKIYGIDPISFIKHAKDAMLTAFVTRSSSGTLPVTMRVAKEMGISEGIYSFTLPLGATINMDGTA  315 (422)
T ss_dssp             HHHHHHHHHHTHHHHHHHTTCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHTTTCCHHHHHHHHHHHTTSCCHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHCCEECCCHHHCCCCCHH
T ss_conf             99999999999999999958888988989999999999715632145799999998597833345315631102688458


Q ss_pred             HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCH------HHHHHHHHHHHHHH
Q ss_conf             899999999998509879989999999999999621368432589999999986159989------99999997777643
Q gi|254780387|r  316 IYITLATLFISQATNVPLSLTDQLSLLLIAMVSSKGAAGVTGSAFITLAATITLVPSLPI------AGMTLILGVDRFMS  389 (426)
Q Consensus       316 ~~~~~~~iFia~~~gi~l~~~~~~~~~~~~~i~s~g~agvPg~~~v~~~~~~~~~~glP~------~~i~ll~~id~~~D  389 (426)
                      +|++++++|++|.||+++++++++.++++++++|+|+||+||++++.+..++... |+|.      +++++++++||++|
T Consensus       316 l~~~~~~if~a~~~g~~lt~~~~~~~~~~~~l~s~g~~gvPg~~~v~~~~vl~~~-glP~~~~~~~~~i~liiaid~l~D  394 (422)
T 2nwl_A          316 LYQGVCTFFIANALGSHLTVGQQLTIVLTAVLASIGTAGVPGAGAIMLAMVLHSV-GLPLTDPNVAAAYAMILGIDAILD  394 (422)
T ss_dssp             HHHHHHHHHHHHHHTCCCCSSCCHHHHHHHHHHHHHSCSSSSHHHHHHHHHHHHH-TCCTTSTTHHHHHHHHHTTHHHHH
T ss_pred             HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHC-CCCCCCCHHHHHHHHHHHHHHHCC
T ss_conf             9999999999999489999899999999999999844786167999999999984-998764115668999997986606


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCCCHH
Q ss_conf             5678998767799999999882510489
Q gi|254780387|r  390 ECRSVTNFIGNAVMTVVVSRWEKKLDPK  417 (426)
Q Consensus       390 ~~rT~~NV~gd~~~a~iv~~~~~~~d~~  417 (426)
                      |+||++||+||++++++++|+||++|+.
T Consensus       395 ~~rT~~NV~gd~~~a~iv~k~~g~ld~~  422 (422)
T 2nwl_A          395 MGRTMVNVTGDLTGTAIVAKTEGTLVPR  422 (422)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHC------
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf             6189994987899999999973888899