HHsearch alignment for GI: 254780388 and conserved domain: cd01464

>cd01464 vWA_subfamily VWA subfamily: Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if
Probab=99.32  E-value=5e-11  Score=88.81  Aligned_cols=154  Identities=16%  Similarity=0.112  Sum_probs=100.5

Q ss_pred             CHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
Q ss_conf             06677766522112346775666520121100677665565576812100566665641256777776458899999862
Q gi|254780388|r  271 KHLVRDALASVIRSIKKIDNVNDTVRMGATFFNDRVISDPSFSWGVHKLIRTIVKTFAIDENEMGSTAINDAMQTAYDTI  350 (458)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~T~~~~gl~~g~~~L  350 (458)
T Consensus        21 i~~~k~al~~~~~~L~~d~~a~~~~~vsVItF~s~a~~~~pl~~~--------~~~~~~~L~a~G~T~~g~al~~a~~~l   92 (176)
T cd01464          21 IEALNQGLQMLQSELRQDPYALESVEISVITFDSAARVIVPLTPL--------ESFQPPRLTASGGTSMGAALELALDCI   92 (176)
T ss_pred             HHHHHHHHHHHHHHHHCCCCCHHEEEEEEEEECCCEEEECCCCCH--------HHCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf             999999999999997118310113269999978951780586347--------664755477789981999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCCEEE
Q ss_conf             36666544445667775069999960668888540899999999879689999943788743117899986068983788
Q gi|254780388|r  351 ISSNEDEVHRMKNNLEAKKYIVLLTDGENTQDNEEGIAICNKAKSQGIRIMTIAFSVNKTQQEKARYFLSNCASPNSFFE  430 (458)
Q Consensus       351 s~~~~~~~~~~~~~~~~~K~iil~TDG~n~~~~~~~~~~C~~~K~~gI~IytI~f~~~~~~~~~~~~~lk~CAs~~~yy~  430 (458)
T Consensus        93 ~~~~~~~~~--~~~~~~~P~I~LlTDG~PtD~~~~~~~~~~~~~~~~~~i~a~giG~da-----d~~~L~~is~~--~~~  163 (176)
T cd01464          93 DRRVQRYRA--DQKGDWRPWVFLLTDGEPTDDLTAAIERIKEARDSKGRIVACAVGPKA-----DLDTLKQITEG--VPL  163 (176)
T ss_pred             HHHHHHCCC--CCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCC-----CHHHHHHHHCC--CCC
T ss_conf             986522365--566775317999668998875899999999888639769999973871-----89999988577--745


Q ss_pred             ECCHHHHHHHH
Q ss_conf             29989999999
Q gi|254780388|r  431 ANSTHELNKIF  441 (458)
Q Consensus       431 a~~~~eL~~aF  441 (458)
T Consensus       164 ~~~~~~f~~ff  174 (176)
T cd01464         164 LDDALSGLNFF  174 (176)
T ss_pred             CCCHHHHHHHH
T ss_conf             34534588850