HHsearch alignment for GI: 254780388 and conserved domain: smart00327
>smart00327 VWA von Willebrand factor (vWF) type A domain. VWA domains in extracellular eukaryotic proteins mediate adhesion via metal ion-dependent adhesion sites (MIDAS). Intracellular VWA domains and homologues in prokaryotes have recently been identified. The proposed VWA domains in integrin beta subunits have recently been substantiated using sequence-based methods.
Probab=99.18 E-value=2.7e-09 Score=77.70 Aligned_cols=140 Identities=16% Similarity=0.226 Sum_probs=89.7
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCC--CCCCCCCHHHHHHHHHHH
Q ss_conf 677766522112346775666520121100677665565576812100566665641256--777776458899999862
Q gi|254780388|r 273 LVRDALASVIRSIKKIDNVNDTVRMGATFFNDRVISDPSFSWGVHKLIRTIVKTFAIDEN--EMGSTAINDAMQTAYDTI 350 (458)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~g~T~~~~gl~~g~~~L 350 (458)
T Consensus 21 ~~k~~~~~~i~~l~~~~---~~~~v~vv~f~~~~~~~~~~~---~~~~~~~~~~~i~~l~~~~~g~t~~~~al~~a~~~~ 94 (177)
T smart00327 21 KAKEFVLKLVEQLDIGP---DGDRVGLVTFSDDATVLFPLN---DSRSKDALLEALASLSYKLGGGTNLGAALQYALENL 94 (177)
T ss_pred HHHHHHHHHHHHHHCCC---CCCEEEEEEECCCEEEEECCC---CCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 99999999999864179---987899999637268997688---868999999999714155788776428999999999
Q ss_pred CCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHCC--CCCE
Q ss_conf 36666544445667775069999960668888540899999999879689999943788743117899986068--9837
Q gi|254780388|r 351 ISSNEDEVHRMKNNLEAKKYIVLLTDGENTQDNEEGIAICNKAKSQGIRIMTIAFSVNKTQQEKARYFLSNCAS--PNSF 428 (458)
Q Consensus 351 s~~~~~~~~~~~~~~~~~K~iil~TDG~n~~~~~~~~~~C~~~K~~gI~IytI~f~~~~~~~~~~~~~lk~CAs--~~~y 428 (458)
T Consensus 95 ~~~~~~~------~~~~~~~iil~TDG~~~~~-~~~~~~~~~~~~~~v~i~~ig~g~~~-----~~~~l~~ia~~~~~~~ 162 (177)
T smart00327 95 FSKSAGS------RRGAPKVLILITDGESNDG-GDLLKAAKELKRSGVKVFVVGVGNDV-----DEEELKKLASAPGGVY 162 (177)
T ss_pred HHHHCCC------CCCCCEEEEEEECCCCCCC-HHHHHHHHHHHHCCCEEEEEEECCCC-----CHHHHHHHHHCCCCEE
T ss_conf 7665037------7887428999805887872-52999999998679489999958847-----9999999984899659
Q ss_pred EE
Q ss_conf 88
Q gi|254780388|r 429 FE 430 (458)
Q Consensus 429 y~ 430 (458)
T Consensus 163 ~~ 164 (177)
T smart00327 163 VF 164 (177)
T ss_pred EE
T ss_conf 99