HHsearch alignment of GI: 254780388 and MMDB domain: 1jey_A_1-252
>1jey_A (A:1-252) KU70; double-strand DNA break repair, non-homologous END-joining, protein/nucleic acid complex, alpha/beta domain, beta barrel; HET: DNA; 2.50A {Homo sapiens}
Probab=99.32 E-value=4.8e-11 Score=88.48 Aligned_cols=168 Identities=11% Similarity=0.068 Sum_probs=101.1
Q ss_pred CCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHH---------HHH---------HHHHHHHHH
Q ss_conf 43306677766522112346775666520121100677665565576812---------100---------566665641
Q gi|254780388|r 268 IKKKHLVRDALASVIRSIKKIDNVNDTVRMGATFFNDRVISDPSFSWGVH---------KLI---------RTIVKTFAI 329 (458)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~---------~~~~~~~i~ 329 (458)
.++++..+.++..++.......+ ..+.+...|+.......++..... ..+ .......-.
T Consensus 57 ~s~~~~~k~~~~~~i~~l~~~~~---~~~v~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (252)
T 1jey_A 57 LTPFDMSIQCIQSVYISKIISSD---RDLLAVVFYGTEKDKNSVNFKNIYVLQELDNPGAKRILELDQFKGQQGQKRFQD 133 (252)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTTC---CCEEEEEEESCSSCBSTTCCTTEEEEEEEECCCHHHHHHHHTTSHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHCCCCCC---CCEEEEEEECCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCHHHHC
T ss_conf 78499999999999996166799---981899997368988888987079950488879999999997640233102210
Q ss_pred CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCC-----HHHHHHHHHHHCCCEEEEEE
Q ss_conf 2567777764588999998623666654444566777506999996066888854-----08999999998796899999
Q gi|254780388|r 330 DENEMGSTAINDAMQTAYDTIISSNEDEVHRMKNNLEAKKYIVLLTDGENTQDNE-----EGIAICNKAKSQGIRIMTIA 404 (458)
Q Consensus 330 ~~~~~g~T~~~~gl~~g~~~Ls~~~~~~~~~~~~~~~~~K~iil~TDG~n~~~~~-----~~~~~C~~~K~~gI~IytI~ 404 (458)
...+.|+|+...||..+..+|.... .....|+|||+|||+++.... ....+++.+|+.||++|+|+
T Consensus 134 ~~~~~g~t~~~~al~~a~~~l~~~~---------~~~~~~~iiliTDG~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~ 204 (252)
T 1jey_A 134 MMGHGSDYSLSEVLWVCANLFSDVQ---------FKMSHKRIMLFTNEDNPHGNDSAKASRARTKAGDLRDTGIFLDLMH 204 (252)
T ss_dssp HHCCSCCCCHHHHHHHHHHHHHTCS---------SCEEEEEEEEEESCSCTTTTCHHHHHHHHHHHHHHHHHTEEEEEEE
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHC---------CCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEC
T ss_conf 3676654439999999999998613---------0236747999889998788753779999999999997090478834
Q ss_pred ECCCCCCCC--HHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHH
Q ss_conf 437887431--1789998606898378829989999999999875
Q gi|254780388|r 405 FSVNKTQQE--KARYFLSNCASPNSFFEANSTHELNKIFRDRIGN 447 (458)
Q Consensus 405 f~~~~~~~~--~~~~~lk~CAs~~~yy~a~~~~eL~~aF~~~i~~ 447 (458)
++.+.+... ....+++.++.....+.....+.|.+.|++|..+
T Consensus 205 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~ 249 (252)
T 1jey_A 205 LKKPGGFDISLFYRDIISIAEDEDLRVHFEESSKLEDLLRKVRAK 249 (252)
T ss_dssp BCCTTCCCTTTTGGGTCC--------CCCCCBCSHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHC
T ss_conf 688898761031687741113322234665156699999876422