HHsearch alignment of GI: 254780388 and MMDB domain: 1mf7_A_
>1mf7_A (A:) Integrin alpha M; cell adhesion; 1.25A {Homo sapiens}
Probab=99.18 E-value=8.4e-10 Score=80.57 Aligned_cols=164 Identities=17% Similarity=0.181 Sum_probs=114.0
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 66777665221123467756665201211006776655655768121005666656412567777764588999998623
Q gi|254780388|r 272 HLVRDALASVIRSIKKIDNVNDTVRMGATFFNDRVISDPSFSWGVHKLIRTIVKTFAIDENEMGSTAINDAMQTAYDTII 351 (458)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~T~~~~gl~~g~~~Ls 351 (458)
+..+.....++..... ...+.+...|+.......+++..... ............+.|+|+...++..+.+.+.
T Consensus 24 ~~~k~~~~~~~~~l~~-----~~~~v~~v~f~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~t~~~~~l~~~~~~~~ 96 (194)
T 1mf7_A 24 RRMKEFVSTVMEQLKK-----SKTLFSLMQYSEEFRIHFTFKEFQNN--PNPRSLVKPITQLLGRTHTATGIRKVVRELF 96 (194)
T ss_dssp HHHHHHHHHHHHHHCC-----TTEEEEEEEESSSEEEEECHHHHHHS--CCHHHHHTTCCCCCSCBCHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHCCC-----CCCEEEEEEEEEEEEEEEECCCCCCH--HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 9999999999997076-----88369999996210576304554548--9999998501013599642079999999886
Q ss_pred CCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHCC--CCC-E
Q ss_conf 6666544445667775069999960668888540899999999879689999943788743117899986068--983-7
Q gi|254780388|r 352 SSNEDEVHRMKNNLEAKKYIVLLTDGENTQDNEEGIAICNKAKSQGIRIMTIAFSVNKTQQEKARYFLSNCAS--PNS-F 428 (458)
Q Consensus 352 ~~~~~~~~~~~~~~~~~K~iil~TDG~n~~~~~~~~~~C~~~K~~gI~IytI~f~~~~~~~~~~~~~lk~CAs--~~~-y 428 (458)
.... ...+...+++||+|||+.+.........-+.+++++++++.+.|..+... +.....|+..|. +|. +
T Consensus 97 ~~~~------~~~~~~~~~iiliTDG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~L~~ia~~~~g~~~ 169 (194)
T 1mf7_A 97 NITN------GARKNAFKILVVITDGEKFGDPLGYEDVIPEADREGVIRYVIGVGDAFRS-EKSRQELNTIASKPPRDHV 169 (194)
T ss_dssp SGGG------TCCTTSEEEEEEEESSCCBSCSSCGGGTHHHHHHTTEEEEEEEESGGGCS-HHHHHHHHHHSCSSHHHHE
T ss_pred HHHC------CCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCC-CCCHHHHHHHHCCCCCCCE
T ss_conf 4542------67678503899983699889803299999999978999999997887666-3579999998669986618
Q ss_pred EEECCHHHHHHHHHHHHHHHH
Q ss_conf 882998999999999987587
Q gi|254780388|r 429 FEANSTHELNKIFRDRIGNEI 449 (458)
Q Consensus 429 y~a~~~~eL~~aF~~~i~~~~ 449 (458)
|.+.+.++|.++|++++....
T Consensus 170 ~~~~~~~~l~~~~~~i~~~i~ 190 (194)
T 1mf7_A 170 FQVNNFEALKTIQNQLREKIF 190 (194)
T ss_dssp EEESSGGGGGGGHHHHHHHHH
T ss_pred EEECCHHHHHHHHHHHHHHHC
T ss_conf 993899999999999987640