HHsearch alignment of GI: 254780388 and MMDB domain: 3ibs_A_
>3ibs_A (A:) Conserved hypothetical protein BATB; structural genomics, protein structure, midwest center for structural genomics, MCSG, PSI-2; HET: MSE; 2.10A {Bacteroides thetaiotaomicron}
Probab=99.42 E-value=1.3e-11 Score=92.09 Aligned_cols=164 Identities=12% Similarity=0.223 Sum_probs=120.9
Q ss_pred CCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
Q ss_conf 43306677766522112346775666520121100677665565576812100566665641256777776458899999
Q gi|254780388|r 268 IKKKHLVRDALASVIRSIKKIDNVNDTVRMGATFFNDRVISDPSFSWGVHKLIRTIVKTFAIDENEMGSTAINDAMQTAY 347 (458)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~T~~~~gl~~g~ 347 (458)
..+++..+..+..+.... ...+.+...|+.......+++...... ...+........+.|+|+...||.++.
T Consensus 31 ~~rl~~~k~~v~~l~~~~-------~~~rv~iv~f~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~T~~~~aL~~a~ 102 (218)
T 3ibs_A 31 PSRLEKAKRLISRLVDEL-------DNDKVGXIVFAGDAFTQLPITSDYISA-KXFLESISPSLISKQGTAIGEAINLAT 102 (218)
T ss_dssp SCHHHHHHHHHHHHHHTC-------SSCEEEEEEESSSEEEEEEEESCHHHH-HHHHHTCCGGGCCSCSCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHC-------CCCEEEEEEECCCCCCCCCCCCHHHHH-HHHHHHHCCCCCCCCCCHHHHHHHHHH
T ss_conf 379999999999999648-------996589999898121120354256677-777876233666689945789999775
Q ss_pred HHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCC---------------
Q ss_conf 86236666544445667775069999960668888540899999999879689999943788743---------------
Q gi|254780388|r 348 DTIISSNEDEVHRMKNNLEAKKYIVLLTDGENTQDNEEGIAICNKAKSQGIRIMTIAFSVNKTQQ--------------- 412 (458)
Q Consensus 348 ~~Ls~~~~~~~~~~~~~~~~~K~iil~TDG~n~~~~~~~~~~C~~~K~~gI~IytI~f~~~~~~~--------------- 412 (458)
+.|.. .+...|.+|++|||..+.. ......+.+|+.+|.||+++++......
T Consensus 103 ~~l~~-----------~~~~~~~~i~itDG~~~~~--~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (218)
T 3ibs_A 103 RSFTP-----------QEGVGRAIIVITDGENHEG--GAVEAAKAAAEKGIQVSVLGVGXPEGAPIPVEGTNDYRRDREG 169 (218)
T ss_dssp TTSCS-----------CSSCCEEEEEEECCTTCCS--CHHHHHHHHHTTTEEEEEEEESCTTCEECBCTTSSCBCBCTTS
T ss_pred HHHCH-----------HHCCCCCEEEECCCCCCCC--CCHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 33011-----------0045653499438987777--5046667766406537653047765544320122220102467
Q ss_pred -----CHHHHHHHHHC--CCCCEEEECCHHHHHHHHHHHHHHHHHHH
Q ss_conf -----11789998606--89837882998999999999987587535
Q gi|254780388|r 413 -----EKARYFLSNCA--SPNSFFEANSTHELNKIFRDRIGNEIFER 452 (458)
Q Consensus 413 -----~~~~~~lk~CA--s~~~yy~a~~~~eL~~aF~~~i~~~~~~~ 452 (458)
......|+..| +.|.||++.+.++|.+.|.+.|.+....+
T Consensus 170 ~~~~~~~~~~~l~~la~~~~g~~~~~~~~~~l~~~~~~~i~~~~~~~ 216 (218)
T 3ibs_A 170 NVIVTRLNEGXCQEIAKDGKGIYVRVDNSNSAQKAISQEISKXAKSD 216 (218)
T ss_dssp CBCEECCCHHHHHHHHHHTEEEEEEECSSSHHHHHHHHHHHHHHHC-
T ss_pred CCCCCCCCHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHCCCC
T ss_conf 54545479999999998549089995187999999999997650434