HHsearch results for GI: 254780388 and protein with PDBid: 1mjn_A

>1mjn_A Integrin alpha-L; rossmann fold, immune system; 1.30A {Homo sapiens} SCOP: c.62.1.1 PDB: 3hi6_A 1mq8_B* 3eoa_I 3eob_I 1rd4_A* 1lfa_A 1zon_A 1zoo_A 1zop_A 1dgq_A 1xdd_A* 1xdg_A* 1xuo_A* 3e2m_A* 3bqn_B* 1cqp_A* 3bqm_B* 2ica_A* 2o7n_A* 3m6f_A* ...
Probab=98.74  E-value=8.1e-08  Score=66.91  Aligned_cols=132  Identities=15%  Similarity=0.147  Sum_probs=82.3

Q ss_pred             EEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHC-CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEE
Q ss_conf             01211006776655655768121005666656412-56777776458899999862366665444456677750699999
Q gi|254780388|r  296 RMGATFFNDRVISDPSFSWGVHKLIRTIVKTFAID-ENEMGSTAINDAMQTAYDTIISSNEDEVHRMKNNLEAKKYIVLL  374 (458)
Q Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~g~T~~~~gl~~g~~~Ls~~~~~~~~~~~~~~~~~K~iil~  374 (458)
                      +.....|........++..   ...+..+...+.. ....|+|+...++.++...+....+..      .+...|++|++
T Consensus        40 ~~~v~~~~~~~~~~~~~~~---~~~~~~~~~~i~~~~~~~g~~~~~~al~~a~~~~~~~~~~~------r~~~~k~ivll  110 (179)
T 1mjn_A           40 QFAAVQFSTSYKTEFDFSD---YVKRKDPDALLKHVKHMLLLTNTFGAINYVATEVFREELGA------RPDATKVLIII  110 (179)
T ss_dssp             EEEEEEESSSEEEEECHHH---HHHHCCHHHHHTTCCCCCBCCCHHHHHHHHHHHTSSGGGTC------CTTSEEEEEEE
T ss_pred             EEEEEEEEECCEECCCCCC---CCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCC------CCCCCEEEEEE
T ss_conf             6999998602111135212---04699999987512557898327889999999985453068------99871489998


Q ss_pred             ECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHCCC---CCEEEECCHHHHHHHHHHH
Q ss_conf             606688885408999999998796899999437887431178999860689---8378829989999999999
Q gi|254780388|r  375 TDGENTQDNEEGIAICNKAKSQGIRIMTIAFSVNKTQQEKARYFLSNCASP---NSFFEANSTHELNKIFRDR  444 (458)
Q Consensus       375 TDG~n~~~~~~~~~~C~~~K~~gI~IytI~f~~~~~~~~~~~~~lk~CAs~---~~yy~a~~~~eL~~aF~~~  444 (458)
                      |||+.+.....       .+..++.++.+++...... ......|+..||.   .++|.+.+-++|.+.++++
T Consensus       111 TDG~~~~~~~~-------~~~~~~~~~~~~i~~~~~~-~~~~~~L~~ias~~~~~~~~~~~~~~~L~~~~~~l  175 (179)
T 1mjn_A          111 TDGEATDSGNI-------DAAKDIIRYIIGIGKHFQT-KESQETLHKFASKPASEFVKILDTFEKLKDLCTEL  175 (179)
T ss_dssp             ESSCCSSCSCC-------GGGTTSEEEEEEESGGGCS-HHHHHTTGGGSCSCHHHHEEEESSGGGSCCHHHHH
T ss_pred             CCCCCCCCHHH-------HHHHCCEEEEEEEEECCCC-CCCHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHH
T ss_conf             07998860689-------9982986889999946886-01799999985799863399879999999999999